CNSO Faculty Articles
Submissions from 1997
The tax Gene Sequences Form Two Divergent Monophyletic Lineages Corresponding to Types I and II of Simian and Human T-Cell Leukemia/Lymphotropic Viruses, Adriana Giri, Jill Pecon-Slattery, Walid Heneine, Antoine Gessain, Emilia Rivadeneira, Ronald C. Desrosiers, Leon Rosen, Ronald Anthony, Joko Pamungkas, Diah Iskandriati, Allen L. Richards, Vincent Herve, Harold McClure, Stephen J. O'Brien, and Genoveffa Franchini
The Relativistic Szego Polynomials, Matthew He, S. Noschese, and P. E. Ricci
Asymptotics of Zeros of Relativistic Hermite Polynomials, Matthew He, K. Pan, and Paolo E. Ricci
Zeros' Asymptotic Distribution of Polynomials Orthogonal with Respect to Varying Weights, Matthew He, P. E. Ricci, and P. Natalini
Numerical Results on the Zeros of Generalized Fibonacci Polynomials, Matthew He, P. E. Ricci, and D. S. Simon
Dynamics of the Zeros of Fibonacci Polynomials, Matthew He, David S. Simon, and Paolo Emilio Ricci
Phylogenetic Reconstruction of the Felidae Using 16S rRNA and NADH-5 Mitochondrial Genes, Warren E. Johnson and Stephen J. O'Brien
Norm Hull of Vectors and Matrices, Chi-Kwong Li, Nam-Kiu Tsing, and Fuzhen Zhang
Sign Patterns of Nonnegative Normal Matrices, Zhongshan Li, Frank Hall, and Fuzhen Zhang
Rates of Nuclear and Cytoplasmic Mitochondrial DNA Sequence Divergence in Mammals, Jose V. Lopez, Melanie Culver, J. Claiborne Stephens, Warren E. Johnson, and Stephen James O'Brien
The Long and Short of Nuclear Mitochondrial DNA (Numt) Lineages, Jose V. Lopez, J. Claiborne Stephens, and Stephen J. O'Brien
Comparative Anchor Tagged Sequences (CATS) for Integrative Mapping of Mammalian Genomes, Leslie A. Lyons, Thomas F. Laughlin, Neal G. Copeland, Nancy A. Jenkins, James E. Womack, and Stephen J. O'Brien
Pet Cat Hair Implicates Murder Suspect, Marilyn Menotti-Raymond, Victor A. David, and Stephen J. O'Brien
Genetic individualization of domestic cats using feline STR loci for forensic applications, Marilyn Menotti-Raymond, Victor A. David, J. Claiborne Stephens, Leslie A. Lyons, and Stephen J. O'Brien
The family line: The human-cat connection, Stephen J. O'Brien
The HIV-AIDS Debate is Over, Stephen J. O'Brien
Comparative Gene Mapping in the Domestic Cat (Felis catus), Stephen J. O'Brien, Stanley Cevario, Janice S. Martenson, M. A. Thompson, William G. Nash, E. Chang, J. A. M. Graves, J. A. Spencer, K.-W. Cho, Hajime Tsujimoto, and Leslie A. Lyons
In Search of AIDS-Resistance Genes, Stephen J. O'Brien and Michael Dean
Comparative Genomics: Lessons From Cats, Stephen J. O'Brien, J. Wienberg, and Leslie A. Lyons
Cloning and Chromosome Mapping of the Feline Genes p21WAF1 and p27Kip1, Masaru Okuda, Ken-ichi Minehata, Asuka Setoguchi University of Tokyo, Kyu-Woan Cho, Noriko Nakamura, Kazuo Nishigaki, Toshihiro Watari, Stanley Cevario, Stephen J. O'Brien, Hajime Tsujimoto, and Atsuhiko Hasegawa
Cool and Freshwater Skin of the Ocean During Rainfall, Peter Schlüssel, Alexander Soloviev, and William J. Emery
CCR2 Chemokine Receptor and AIDS Progression, Michael W. Smith, Mary Carrington, Cheryl Winkler, Deborah A. Lomb, Michael Dean, Gavin A. Huttley, and Stephen J. O'Brien
CCR5-Δ32 Gene Deletion in HIV-1 Infected Patients, Michael W. Smith, Michael Dean, Mary Carrington, Gavin A. Huttley, and Stephen J. O'Brien
Contrasting Genetic Influence of CCR2 and CCR5 Variants on HIV-1 Infection and Disease Progression, Michael W. Smith, Michael Dean, Mary Carrington, Cheryl Winkler, Gavin A. Huttley, Deborah A. Lomb, James J. Goedert, Thomas R. O'Brien, Lisa Jacobson, Richard A. Kaslow, Susan Buchbinder, Eric Vittinghoff, David Vlahov, Keith Hoots, Margaret Hilgartner, Hemophilia Growth and Development Study, Multicenter AIDS Cohort Study, Multicenter Hemophilia Cohort Study, San Francisco City Cohort, ALIVE Study, and Stephen J. O'Brien
Observation of Large Diurnal Warming Events in the Near-Surface Layer of the Western Equatorial Pacific Warm Pool, Alexander Soloviev and Roger Lukas
Sharp Frontal Interfaces in the Near-Surface Layer of the Ocean in the Western Equatorial Pacific Warm Pool, Alexander Soloviev and Roger Lukas
Conservation Genetics of the Koala (Phascolarctos cinereus) : Low Mitochondrial DNA Variation Amongst Southern Australian Populations, Andrea C. Taylor, Jenny Marshall Graves, Neil D. Murray, Stephen J. O'Brien, Naoya Yuhki, and Bill Sherwin
Infectivity of Lion and Puma Lentiviruses for Domestic Cats, Sue VandeWoude, Stephen J. O'Brien, and Edward A. Hoover
Growth of Lion and Puma Lentiviruses in Domestic Cat Cells and Comparisons with FIV, Sue VandeWoude, Stephen J. O'Brien, Ken Langelier, William D. Hardy, Jill P. Slattery, Evelyn E. Zuckerman, and Edward A. Hoover
Schur Complements and Matrix Inequalities of Hadamard Products, Bo-Ying Wang and Fuzhen Zhang
Conservation of Human vs. Feline Genome Organization Revealed by Reciprocal Chromosome Painting, J. Weinberg, R. Stanyon, W. G. Nash, P. C. O'Brien, F. Yang, Stephen J. O'Brien, and M. A. Ferguson-Smith
Nature and Origin of Polymorphism in Feline MHC Class II DRA and DRB Genes, Naoya Yuhki and Stephen J. O'Brien
Quaternions and Matrices of Quaternions, Fuzhen Zhang
Submissions from 1996
Comparative Genome Organization of Vertebrates, L. Andersson, A. Archibald, M. Ashburner, S. Audun, W. Barendse, J. Bitgood, C. Bottema, T. Broad, S. Brown, D. Burt, C. Charlier, N. Copeland, S. Davis, M. Davisson, J. Edwards, A. Eggen, G. Elgar, J. T. Eppig, I. Franklin, P. Grewe, T. Gill, J. A. M. Graves, R. Hawken, J. Hetzel, A. Hilyard, H. Jacob, L. Jaswinska, N. Jenkins, H. Kunz, G. Levan, O. Lie, Leslie A. Lyons, P. Maccarone, C. Mellersh, G. Montgomery, S. Moore, C. Moran, D. Morizot, M. Neff, F. Nicholas, Stephen J. O'Brien, Y. Parsons, J. Peters, J. Postlethwait, M. Raymond, M. Rothschild, L. Schook, Y. Sugimoto, C. Szpirer, M. Tate, J. Taylor, J. VandeBerg, M. Wakefield, J. Wienberg, and James E. Womack
Constraints on the Minimal Supergravity Model from Non-Standard Vacua, Howard Baer, Michal Brhlik, and Diego Castano
Ligand Effects on the δ → δ* Band Energies and Intensities in a Series of Diimine Complexes of Dimolybdenum, Donald M. Baird, F. L. Yang, D. J. Kavanaugh, G. Finness, and K. R. Dunbar
Benthic Foraminifera from the NECOP Study Area Impacted by the Mississippi River Plume and Seasonal Hypoxia, Patricia Blackwelder, Terri Hood, Carlos A. Alvarez Zarikian, Terry A. Nelsen, and Brent McKee
Genetic and Phylogenetic Divergence of Feline Immunodeficiency Virus in the Puma (Puma concolor), Margaret A. Carpenter, Eric W. Brown, Melanie Culver, Warren E. Johnson, Jill Pecon-Slattery, Dulce Brousset, and Stephen J. O'Brien
Consequences of Supergravity with Gauged U(1)R Symmetry, Diego Castano, D. Z. Freedman, and C. Manuel
A Short-Wavelength Photoreceptor Class in a Deep-Sea Shrimp, Thomas W. Cronin and Tamara M. Frank
Participants in HIV Study: Correction, Michael Dean, Mary Carrington, James J. Goedert, and Stephen J. O'Brien
Genetic Restriction of HIV-1 Infection and Progression to AIDS by a Deletion Allele of the CKR5 Structural Gene, Michael Dean, Mary Carrington, Cheryl Winkler, Gavin A. Huttley, Michael W. Smith, Rando Allikmets, James J. Goedert, Susan Buchbinder, Eric Vittinghoff, Edward Gomperts, Sharyne Donfield, David Vlahov, Richard A. Kaslow, A. J. Saah, Charles Rinaldo, Roger Detels, Hemophilia Growth and Development Study, Multicenter AIDS Cohort Study, Multicenter Hemophilia Cohort Study, San Francisco City Cohort, and Stephen J. O'Brien
Molecular Genetic Identification of a Mexican Onza Speciment as a Puma (Puma concolor), Peter A. Dratch, Wendy Roslund, Janice S. Martenson, Melanie Culver, and Stephen J. O'Brien
Human Phylogenetic Relationships According to the D1S80 Locus, George Duncan, Emmanuel Thomas, Juan C. Gallol, Lynn S. Baird, Jennifer Garrison, and Rene J. Herrera
Coral Survivors of the 1982–83 El Niño-Southern Oscillation, Galápagos Islands, Ecuador, Joshua S. Feingold
UV Light in the Deep‐Sea: In Situ Measurements of Downwelling Irradiance in Relation to the Visual Threshold Sensitivity of UV‐Sensitive Crustaceans, Tamara M. Frank and Edith A. Widder
Explicit Representations of Faber Polynomials for m-Cusped Hypocycloids, Matthew He
Asymptotic Distribution of Zeros of Weighted Fibonacci Polynomials, Matthew He and Paolo E. Ricci
Prevalence of Antibodies to Feline Parvovirus, Calicivirus, Herpesvirus, Coronavirus, and Immunodeficiency Virus and of Feline Leukemia Virus Antigen and the Interrelationship of These Viral Infections in Free-Ranging Lions in East Africa, Regina Hofmann-Lehmann, Daniela Fehr, Markus Grob, Muhamed Elgizoli, Craig Packer, Janice S. Martenson, Stephen J. O'Brien, and Hans Lutz
The Trophic Structure and Predation Impact of a Low Latitude Midwater Fish Assemblage, T. L. Hopkins, Tracey Sutton, and Thomas M. Lancraft
Serum Antibody to Rift Valley Fever Virus in African Carnivores, Carol House, Kathleen A. Alexander, Pieter W. Kat, Stephen J. O'Brien, and Joseph Mangiafico
An Operator Inequality and Matrix Normality, Charles R. Johnson and Fuzhen Zhang
Resolution of Recent Radiations Within Three Evolutionary Lineages of Felidae using Mitochondrial Restriction Fragment Length Polymorphism Variation, Warren E. Johnson, Peter A. Dratch, Janice S. Martenson, and Stephen J. O'Brien
Rescue and Maturation in Vitro of Follicular Oocytes Collected from Nondomestic Felid Species, L. A. Johnston, A. M. Donoghue, Stephen J. O'Brien, and David E. Wildt
Influence of Combinations of Human Major Histocompatibility Complex Genes on the Course of HIV−1 Infection, Richard A. Kaslow, Mary Carrington, R. Apple, L. Park, A. Muñoz, A. J. Saah, James J. Goedert, Cheryl Winkler, Stephen J. O'Brien, Charles Rinaldo, Roger Detels, W. Blattner, John Phair, H. Erlich, and Dean L. Mann
The Origin of Variations in the Isotopic Record of Scleractinian Corals: I. Oxygen, J. J. Leder, Peter Koenraad Swart, Alina Szmant, and Richard E. Dodge (editor)
Pulsed Delivery of Subthermocline Water to Conch Reef (Florida Keys) by Internal Tidal Bores, James J. Leichter, Stephen R. Wing, Steven Miller, and Mark W. Denny
Lead Resistance and Sensitivity in Staphylococcus aureus, Hillel S. Levinson, Inga Mahler, Patricia Blackwelder, and Terri Hood
Complete Nucleotide Sequences of the Domestic Cat (Felis catus) Mitochondrial Genome and a Transposed mtDNA Tandem Repeat (Numt) in the Nuclear Genome, Jose V. Lopez, Stanley Cevario, and Stephen J. O'Brien
Molecular Phylogeny of Mitochondrial Cytochrome b and 12S rRNA Sequences in the Felidae: Ocelot and Domestic Cat Lineages, Ryuichi Masuda, Jose V. Lopez, Jill Pecon Slattery, Naoya Yuhki, and Stephen James O'Brien
Phylogeographic subspecies recognition in leopards (Panthera pardus): Molecular genetic variation, Sriyanie Miththapala, John Seidensticker, and Stephen J. O'Brien
HIV Causes AIDS: Koch's Postulates Fulfilled, Stephen J. O'Brien and James J. Goedert
Experimental Studies of Rapid Bioerosion of Coral reefs in the Galápagos Islands, M. L. Reaka-Kudla, Joshua S. Feingold, and Peter W. Glynn
A Canine Distemper Virus Epidemic in Serengeti Lions (Panthera leo), Melody E. Roelke-Parker, Linda Munson, Craig Packer, Richard Kock, Sarah Cleaveland, Margaret A. Carpenter, Stephen J. O'Brien, Andreas Pospischil, Regina Hofmann-Lehmann, Hans Lutz, George L. M. Mwamengele, M. N. Mgasa, G. A. Machange, Brian A. Summers, and Max J. G. Appel
Analysis of a volunteer method for collecting fish presence and abundance data in the Florida Keys, Emily F. Schmitt Lavin and Kathleen M. Sullivan-Sealey
Report of the Fifth International Workshop on Human Chromosome 11 Mapping 1996, T. B. Shows, M. Alders, S. Bennett, D. Burbee, P. Cartwright, S. Chandrasekharappa, P. Cooper, A. Courseaux, C. Davies, M. D. Devignes, P. Devilee, R. Elliott, G. Evans, J. Fantes, H. Garner, P. Gaudray, D. S. Gerhard, M. Gessler, M. Higgins, H. Hummerich, M. James, J. Lagercrantz, M. Litt, P. Little, M. Mannens, D. Munroe, N. Nowak, Stephen J. O'Brien, N. Parker, M. Perlin, L. Reid, C. Richard, M. Sawicki, D. Swallow, R. Thakker, E. van Heyningen, I. Vorechovsky, C. Wadelius, B. Weber, and B. Zabel
Phylogenetic Evidence from the IRBP Gene for the Paraphyly of Toothed Whales, with Mixed Support for Cetacea as a Suborder of Artiodactyla, Marta R. Smith, Mahmood S. Shivji, Victor G. Waddell, and Michael Stanhope
Observation of Spatial Variability of Diurnal Thermocline and Rain-Formed Halocline in the Western Pacific Warm Pool, Alexander Soloviev and Roger Lukas
Evolution of Cool Skin and Direct Air-Sea Gas Transfer Coefficient During Daytime, Alexander Soloviev and Peter Schlüssel
Development of a Deoxyribonucleic Acid (DNA) Restriction Fragment Length Polymorphism (RFLP) Database for Punjabis in East Punjab, India, Sandra M. Sovinski, Lynn S. Baird, B. Budowle, Joseph F. Caruso, Devinder P. S. Cheema, George Duncan, Patricia F. Hamby, Arni S. Masibay, Vijay K. Sharma, and Mohammed Tahir
Mammalian Evolution and the Interphotoreceptor Retinoid Binding Protein (IRBP) Gene: Convincing Evidence for Several Superordinal Clades, Michael Stanhope, Marta R. Smith, Victor G. Waddell, Calvin A. Porter, Mahmood S. Shivji, and Morris Goodman
Papillomavirus-Associated Focal Oral Hyperplasia in Wild and Captive Asian Lions (Panthera leo persica), John P. Sundberg, Richard J. Montali, Mitchell Bush, Lyndsay G. Phillips Jr., Stephen J. O'Brien, Bennett Jenson, Robert D. Burk, and Marc Van Ranst
Species Composition, Abundance, and Vertical Distribution of the Stomiid (Pisces: Stomiiformes) Fish Assemblage of the Gulf of Mexico, Tracey Sutton and T. L. Hopkins
Trophic Ecology of the Stomiid (Pisces: Stomiidae) Fish Assemblage of the Eastern Gulf of Mexico: Strategies, selectivity and Impact of a Top Mesopelagic Predator Group, Tracey Sutton and T. L. Hopkins
A 240-Year Stable Oxygen and Carbon Isotopic Record in a Coral from South Florida: Implications for the Prediction of Precipitation in Southern Florida, Peter Koenraad Swart, Richard E. Dodge, and Harold J. Hudson
The Stable Oxygen and Carbon Isotopic Record from a Coral Growing in Florida Bay: a 160 Year Record of Climatic and Anthropogenic Influence, Peter Koenraad Swart, Genevieve F. Healy, Richard E. Dodge, Philip Kramer, Harold J. Hudson, Robert B. Halley, and Michael B. Robblee
The Origin of Variations in the Isotopic Record of Scleractinian Corals: II. Carbon, Peter Koenraad Swart, J. J. Leder, Alina Szmant, and Richard E. Dodge (editor)
Ecology and Behavior of Maxillipius commensalis, a Gorgonophile Amphipod from Madang, Papua New Guinea (Crustacea: Amphipoda: Maxillipiidae), James Darwin Thomas
The Generalized Numerical Range with Completely Symmetric Function, Fuzhen Zhang and Tian-Gang Lei
Genomic Differentiation Among Natural Populations of Orang-Utan (Pongo pygmaeus), Lu Zhi, William B. Karesh, Dianne N. Janczewski, Harmony Frazier-Taylor, Dondin Sajuthi, Francis Gombek, Mahedi Andau, Janice S. Martenson, and Stephen J. O'Brien
Submissions from 1995
African Horse Sickness and African Carnivores, K. A. Alexander, P. W. Kat, Carol House, Stephen J. O'Brien, M. Karen Laurenson, J. Weldon McNutt, and Bennie I. Osburn
Challenging Weak-Scale Supersymmetry at Colliders, Greg W. Anderson and Diego Castano
Measure of Fine Tuning, Greg W. Anderson and Diego Castano
Naturalness and Superpartner Masses or When to Give Up on Weak Scale Supersymmetry, Greg W. Anderson and Diego Castano
Mechanism of an Oxygen Atom Transfer Reaction Involving an Oxo-bridged Mo(V) Complex, Donald M. Baird, C. Aburri, L. S. Barron, and S. A. Rodriguez
Taphonomy of Isocrinid Stalks: Influence of Decay and Autotomy, Tomasz K. Baumiller, Ghislaine Llewellyn, Charles G. Messing, and William I. Ausich
Coadaptation and Immunodeficiency Virus: Lessons from the Felidae, Margaret A. Carpenter and Stephen J. O'Brien
Genome Evolution Comes of Age, Daniel L. Hartl, Fotis C. Kafatos, and Stephen J. O'Brien
On the Zeros of Weighted Faber Polynomials, Matthew He
The Faber Polynomials for Circular Lunes, Matthew He
Molecular Evolution of Mitochondrial 12S RNA and Cytochrome b Sequences in the Pantherine Lineage of Felidae, Dianne N. Janczewski, William Modi, J. Claiborne Stephens, and Stephen J. O'Brien
Erratum: “The Robertson-Taussky Inequality Revisited”, Charles R. Johnson and Fuzhen Zhang
Assignment of Islet Amyloid Polypeptide (IAPP) Gene to Feline Chromosome B4 Using the Polymerase Chain Reaction Technique on Feline-Rodent Hybrid Cell Lines, K. Jordan, Stephen J. O'Brien, K. H. Johnson, and T. D. O'Brien
Evolutionary Conservation of Ten Microsatellite Loci in Four Species of Felidae, Marilyn Menotti-Raymond and Stephen J. O'Brien
Hypervariable Genomic Variation to Reconstruct the Natural History of Populations: Lessons from the Big Cats, Marilyn Menotti-Raymond and Stephen J. O'Brien
Alloeocomatella, a New Genus of Reef-Dwelling Feather Star from the Tropical Indo-West Pacific (Echinodermata, Crinoidea, Comasteridae), Charles G. Messing
Redescription of a Unique Feather Star (Echinodermata: Crinoidea: Comatulida: Comasteridae) with the Diagnosis of a New Genus, Charles G. Messing
Polymorphic Human Specific Alu Insertions as Markers for Human Identification, Gabriel E. Novick, Corina C. Novick, Juan Yunis, Emilio Yunis, Kianfa Martinez, George Duncan, Gary M. Troup, Prescott L. Deininger, Mark Stoneking, Mark A. Batzer, and Rene J. Herrera
Genomic Prospecting, Stephen J. O'Brien
Molecular Phylogeny of the Red Panda (Ailurus fulgens), Jill Pecon-Slattery and Stephen J. O'Brien