CNSO Faculty Articles
Submissions from 2002
Stereoselective Synthesis of Some Novel Heterocyclic Estrone Derivatives by Intramolecular 1,3-Dipolar Cycloaddition, Eva Frank, Janos Wolfling, Beatrix Aukszi, Veronica Konig, Thomas R. Schneider, and Gyula Schneider
Effects of a Decrease in Downwelling Irradiance on the Daytime Vertical Distribution Patterns of Zooplankton and Micronekton, Tamara M. Frank and Edith A. Widder
Measurements of Selected Dicarboxylic Acids in Marine Cloud Water, Dean A. Hegg, Song Gao, and Haflidi Jonsson
Differential Equation of Appell Polynomials Via the Factorization Method, Matthew He and Paolo E. Ricci
Information entropy of orthogonal, Matthew He and P. E. Ricci
Fibonacci-Type Polynomials as a Trajectory of a Discrete Dynamical System, Matthew He, Davis P. Simon, and Paolo E. Ricci
Functional morphology of coral shape and passive hydrodynamic self-righting in recent Manicina areolata, Bernhard Hubmann, Werner E. Piller, and Bernhard Riegl
Human Immunodeficiency Virus Type 1 (HIV-1)-Specific CD8+-T-Cell Responses for Groups of HIV-1-Infected Individuals with Different HLA-B*35 Genotypes, Xia Jin, Xiaojiang Gao, Murugappan Ramanathan Jr., Geoffrey R. Deschenes, George W. Nelson, Stephen J. O'Brien, James J. Goedert, David D. Ho, Thomas R. O'Brien, and Mary Carrington
Characteristics of Active Galactic Nuclei in the Ultraviolet, Stefan Kautsch and Werner W. Zeilinger
3-Methoxy-1'-phenyl-4'[beta],5-dihydro-1H-pyrazolo[4',3':16,17]estra-1,3,5(10)-triene, Veronica Konig, Thomas R. Schneider, E. Frank, Beatrix Aukszi, Gyula Schneider, and Janos Wolfling
Characterization of Genetic Markers for In Vitro Cell Line Identification of the Marine Sponge Axinella corrugata, Jose V. Lopez, C. L. Peterson, Robin Willoughby, A. E. Wright, E. Enright, S. Zoladz, John K. Reed, and Shirley A. Pomponi
Detection of the toxin Hirsutellin A from Hirsutella thompsonii, S. Maimala, Aurelien Tartar, Drion G. Boucias, and A. Chandrapatya
Eighteen Polymorphic Microsatellite Markers for the Highly Endangered Spanish Imperial Eagle (Aquila adalberti) and Related Species, Begoña Martinez-Cruz, Victor A. David, Jose A. Godoy, Juan J. Negro, Stephen J. O'Brien, and Warren E. Johnson
Epistatic Interaction Between KIR3DS1 and HLA-B Delays the Progression to AIDS, Maureen P. Martin, Xiaojiang Gao, Jeong-Hee Lee, George W. Nelson, Roger Detels, James J. Goedert, Susan Buchbinder, Keith Hoots, David Vlahov, John Trowsdale, Michael Wilson, Stephen J. O'Brien, and Mary Carrington
Sequencing the Genome of the Domestic Cat Felis catus, Stephen J. O'Brien, Eric S. Lander, M. E. Haskins, Urs Giger, Niels C. Pederson, David E. Wildt, William J. Murphy, Naoya Yuhki, and Marilyn Menotti-Raymond
The Feline Genome Project, Stephen J. O'Brien, Marilyn Menotti-Raymond, William J. Murphy, and Naoya Yuhki
Faecal Genetic Analysis to Determine the Presence and Distribution of Elusive Carnivores: Design and Feasibility for the Iberian Lynx, F. Palomares, Jose A. Godoy, A. Piriz, Stephen J. O'Brien, and Warren E. Johnson
High Resolution Ground Verification, Cluster Analysis and Optical Model of Reef Substrate Coverage on Landsat TM Imagery (Red Sea, Egypt), Samuel J. Purkis, J. A. M. Kenter, E. K. Oikonomou, and I. S. Robinson
Holocene Coral Reef Rubble and Its Binding Agents, M. Rasser and Bernhard Riegl
Effects of the 1996 and 1998 Positive Sea-Surface Temperature Anomalies on Corals, Coral Diseases and Fish in the Arabian Gulf (Dubai, UAE), Bernhard Riegl
Naked Amoebae of the Salton Sea, Andrew Rogerson and Gwen Hauer
Artificial Keys to the Genera of Living Stalked Crinoids (Echinodermata), Michel Roux, Charles G. Messing, and Nadia Améziane
Air-Sea Gas Exchange: Cool Skin and Gas Transfer Velocity in the North Atlantic Ocean During GasEx-98, P. Schlussel and Alexander Soloviev
Evaluating the use of roving diver and transect surveys to assess the coral reef fish assemblage off southeastern Hispaniola, Emily F. Schmitt Lavin, Robert D. Sluka, and Kathleen M. Sullivan-Sealey
Very High-Frequency Radar Mapping of Surface Currents, Lynn K. Shay, Thomas M. Cook, Hartmut Peters, Arthur Mariano, Robert H. Weisberg, P. Edgar An, Alexander Soloviev, and Mark E. Luther
HIV-1 Infection in Individuals With the CCR5-Δ32/Δ32 Genotype: Acquisition of Syncytium-Inducing Virus at Seroconversion, Haynes W. Sheppard, Nelson L. Michael, Stephen J. O'Brien, Michael Dean, Mary Carrington, Dale Dondero, and Susan Buchbinder
Genetic Identification of Pelagic Shark Body Parts for Conservation and Trade Monitoring, Mahmood S. Shivji, Shelley C. Clarke, Melissa Pank, Lisa Natanson, Nancy Kohler, and GlaxoSmithKline Pharmaceuticals
Sharp Frontal Interfaces in the Near-Surface Layer of the Tropical Ocean, Alexander Soloviev, Roger Lukas, and Hiroshi Matsuura
Phylogenetic analysis identifies the invertebrate pathogen Helicosporidium sp. as a green alga (Chlorophyta), Aurelien Tartar, Drion G. Boucias, Byron J. Adams, and James J. Becnel
HLA-Cw*04 and Hepatitis C Virus Persistence, Chloe L. Thio, Xiaojiang Gao, James J. Goedert, David Vlahov, Kenrad E. Nelson, Margaret Hilgartner, Stephen J. O'Brien, Peter Karacki, Jacquie Astemborski, Mary Carrington, and David L. Thomas
The Importance of Assessing Effect Modification When Asserting Racial Differences in Associations Between Human Leukocyte Antigen Class II Alleles and Hepatitis C Virus Outcomes, Chloe L. Thio, Stephen J. O'Brien, and Mary Carrington
Conservation Genetics of the Far Eastern Leopard (Panthera pardus orientalis), Olga Uphyrkina, Dale Miquelle, Howard Quigley, Carlos A. Driscoll, and Stephen J. O'Brien
Nonpathogenic Lion and Puma Lentiviruses Impart Resistance to Superinfection by Virulent Feline Immunodeficiency Virus, Sue VandeWoude, Catherine A. Hageman, Stephen J. O'Brien, and Edward A. Hoover
Sexual Reproduction of Acropora cervicornis in Nearshore Waters Off Fort Lauderdale, Florida, USA, Bernardo Vargas-Ángel and James Darwin Thomas
In Situ Observations on Three Species of Large-Finned Deep-Sea Squids, M. Vecchione, C. F. E. Roper, Edith A. Widder, and Tamara M. Frank
Fish Assemblages Associated with Artificial Reefs of Concrete Aggregates or Quarry Stone Offshore Miami Beach, Florida, USA, Brian K. Walker, Bruce Henderson, and Richard E. Spieler
Clear-Column Radiative Closure During ACE-Asia: Comparison of Multiwavelength Extinction Derived from Particle Size and Composition with Results from Sun Photometry, J. Wang, Richard C. Flagan, John H. Seinfeld, Haflidi Jonsson, D. R. Collins, P. B. Russell, Beat Schmid, Jens Redemann, J. M. Livingston, Song Gao, Dean A. Hegg, and E. J. Welton
Immunologic Profile of Highly Exposed Yet HIV Type 1-Seronegative Men, Otto Yang, W. John Boscardin, Jose Matud, Mary Ann Hausner, Lance E. Hultin, Patricia M. Hultin, Roger Shih, John Ferbas, Frederick P. Siegal, Michael Shodell, Gene M. Shearer, Edith Grene, Mary Carrington, Stephen J. O'Brien, Charles B. Price, Roger Detels, Beth D. Jamieson, and Janis Giorgi
Submissions from 2001
A Century of Environmental Variability in Oyster Bay Using Ostracode Ecological and Isotopic Data as Paleoenvironmental Tools, Carlos A. Alvarez-Zarikian, Peter Koenraad Swart, Terri Hood, Patricia Blackwelder, Terry A. Nelsen, and Charles Featherstone
Comparative Feline Genomics: A BAC/PAC Contig Map of the Major Histocompatibility Complex Class II Region, Thomas W. Beck, Joan C. Menninger, Ginny Voigt, Kimberly Newmann, Yoko Nishigaki, William G. Nash, Robert M. Stephens, Yu Wang, Pieter J. de Jong, Stephen J. O'Brien, and Naoya Yuhki
In-cloud oxidation of SO2 by O3 and H2O2: Cloud Chamber Measurements and Modeling of Particle Growth, Peter F. Caffrey, William Hoppel, Glendon Frick, Louise Pasternack, James Fitzgerald, Dean A. Hegg, Song Gao, W. R. Leaitch, Nicole Shantz, Thomas Albrechcinski, and John Ambrusko
MHC Class I Molecules and Progression to AIDS, Mary Carrington, Xiaojiang Gao, and Stephen J. O'Brien
Considering Genetic Profiles in Functional Studies of Immune Responsiveness to HIV-1, Mary Carrington, George Nelson, and Stephen J. O'Brien
Comparatively High Densities of the Long-Spined Sea Urchin in the Dry Tortugas, Florida, Mark Chiappone, Steven Miller, Dione W. Swanson, Jerald Ault, and S. G. Smith
Patterns of Size Homoplasy at 10 Microsatellite Loci in Pumas (Puma concolor), Melanie Culver, Marilyn Menotti-Raymond, and Stephen J. O'Brien
Hepatitis C Virus Load is Associated with Human Immunodeficiency Virus Type 1 Disease Progression in Hemophiliacs, Eric S. Daar, Henry Lynn, Sharyne Donfield, Edward Gomperts, Stephen J. O'Brien, Margaret Hilgartner, Keith Hoots, David Chernoff, Steven Arkin, W.-Y. Wong, Cheryl Winkler, and Hemophilia Growth and Development Study
Phylogeography, Population History and Conservation Genetics of Jaguars (Panthera onca, Mammalia, Felidae), Eduardo Eizirik, Jae-Heup Kim, Marilyn Menotti-Raymond, Peter G. Crawshaw Jr., Stephen J. O'Brien, and Warren E. Johnson
Molecular Dating and Biogeography of the Early Placental Mammal Radiation, Eduardo Eizirik, William J. Murphy, and Stephen J. O'Brien
Reactivity of the Europium Hexafluoroacetylacetonate (hfac) Complex, Eu(hfac)3(diglyme), and Related Analogs with Potassium: Formation of the Fluoride hfac "ate" Complexes [LnF(hfac)3K(diglyme)]2, William J. Evans, Dimitri Giarikos, Matthew A. Johnston, Michael A. Greci, and Joseph W. Ziller
Reactivity of the Substituted Butadienes, Isoprene and Myrcene, with Decamethylsamarocene, William J. Evans, Dimitri Giarikos, Christopher B. Robledo, Voon S. Leong, and Joseph W. Ziller
Lanthanide Carboxylate Precursors for Diene Polymerization Catalysis: Syntheses, Structures, and Reactivity with Et2AlCl, William J. Evans, Dimitri Giarikos, and Joseph W. Ziller
The Tetramethylpiperidinyl-1-Oxide Anion (TMPO-) as a Ligand in Lanthanide Chemistry: Synthesis of the Per(TMPO-) Complex [(ONC5H6Me4)2Sm(μ-ONC5H6Me4)]2, William J. Evans, Jeremy M. Perotti, Robert J. Doedens, and Joseph W. Ziller
Responses of Three Coral Communities to the 1997–98 El Niño–Southern Oscillation: Galápagos Islands, Ecuador, Joshua S. Feingold
Experimental and Modeling Studies of Secondary Organic Aerosol Formation and Some Applications to the Marine Boundary Layer, Song Gao, Dean A. Hegg, Glendon Frick, Peter F. Caffrey, Louise Pasternack, Chris Cantrell, William Sullivan, John Ambrusko, Thomas Albrechcinski, and Thomas W. Kirchstetter
Effect of a Single Amino Acid Change in MHC Class I Molecules on the Rate of Progression to AIDS, Xiaojiang Gao, George W. Nelson, Peter Karacki, Maureen P. Martin, John Phair, Richard A. Kaslow, James J. Goedert, Susan Buchbinder, Keith Hoots, David Vlahov, Stephen J. O'Brien, and Mary Carrington
Population Density Methods for Large-Scale Modeling of Neuronal Networks with Realistic Synaptic Kinetics, Evan Haskell, D. Q. Nykamp, and D. Tranchina
Population Density Methods for Large-Scale Modelling of Neuronal Networks with Realistic Synaptic Kinetics: Cutting the Dimension Down to Size, Evan Haskell, D. Q. Nykamp, and D. Tranchina
Platyamoeba pseudovannellida N. Sp., a Naked Amoeba With Wide Salt Tolerance Isolated from the Salton Sea, California, Gwen Hauer, Andrew Rogeson, and O. Roger Anderson
Laboratory Studies of the Efficiency of Selected Organic Aerosols as CCN, Dean A. Hegg, Song Gao, W. Hoppel, Glendon Frick, Peter F. Caffrey, W. R. Leaitch, N. Shantz, John Ambrusko, and Thomas Albrechcinski
Double Helical Sequences and Doubly Stochastic Matrices, Matthew He
Validation of Genetic Case-Control Studies in AIDS and Application to the CX3CR1 Polymorphism, Houria Hendel, Cheryl Winkler, Ping An, Elisabeth Roemer-Binns, George Nelson, Philippe Haumont, Stephen J. O'Brien, Kamel Khalilli, Jean-Francois Zagury, Jay Rappaport, and Jean-Francois Zagury
Temporal Records of δ13C and δ15N in North Pacific Pinnipeds: Inferences Regarding Environmental Change and Diet, Amy Hirons, Donald M. Schell, and Bruce P. Finney
Growth Rates of Vibrissae of Harbor Seals (Phoca vitulina) and Steller Sea Lions (Eumetopias jubatus), Amy Hirons, Donald M. Schell, and David J. St. Aubin
Particle Formation and Growth From Ozonolysis of α-pinene, William Hoppel, James Fitzgerald, Glendon Frick, Peter F. Caffrey, Louise Pasternack, Dean A. Hegg, Song Gao, W. Richard Leaitch, Nicole Shantz, Chris Cantrell, Thomas Albrechcinski, John Ambrusko, and William Sullivan
Sulfur Dioxide Uptake and Oxidation in Sea-Salt Aerosol, William Hoppel, Louise Pasternack, Peter F. Caffrey, Glendon Frick, James Fitzgerald, Dean A. Hegg, Song Gao, John Ambrusko, and Thomas Albrechcinski
Structure and patterns of sequence variation in the mitochondrial DNA control region of the great cats, Kim Jae-Heup, E. Eizirik, S. J. O'Brien, and W. E. Johnson
Review of the Marine Mammals of the Gulf of Mexico, Edward O. Keith
Structure and Patterns of Sequence Variation in the Mitochondrial DNA Control Region of the Great Cats, Jae-Heup Kim, Eduardo Eizirik, Stephen J. O'Brien, and Warren E. Johnson
Degradation of Emergent and Submerged Macrophytes in an Oxbow Lake of an Embanked Backwater System: Implications for the Terrestrialization Process, Alexander K. T. Kirschner, Bernhard Riegl, and Branko Velimirov
Patterns of Genetic Diversity in Remaining Giant Panda Populations, Zhi Lu, Warren E. Johnson, Marilyn Menotti-Raymond, Naoya Yuhki, Janice S. Martenson, Susan Mainka, Huang Shi-Qiang, Zheng Zhihe, Guanghan Li, Wenshi Pan, Xiarong Mao, and Stephen J. O'Brien
Serological Changes Associated with Gill-Net Capture and Restraint in Three Species of Sharks, C. Manire, R. Hueter, Eric V. Hull, and Richard E. Spieler
A Revision of the Zenometridae (new rank) (Echinodermata, Crinoidea, Comatulidina), Charles G. Messing and Christopher M. White
An Extensive Deep Reef Terrace on the Tortugas Bank, Florida Keys National Marine Sanctuary, Steven Miller, Mark Chiappone, Dione W. Swanson, Jerald Ault, S. G. Smith, G. Meester, J. Luo, E. Franklin, James A. Bohnsack, Doug Harper, and David B. McClellan
Applying Habitat Equivalency Analysis for Coral Reef Damage Assessment and Restoration, J. Walter Milon and Richard E. Dodge (editor)
Surgical Management of Dyslipidemia: Clinical and Experimental Evidence, Mohammed H. Moghadasian, Jiri J. Frohlich, Mir Saleem, Jong-Myeon Hong, Karim Qayumi, and Charles H. Scudamore
Molecular Phylogenetics and the Origins of Placental Mammals, William J. Murphy, Eduardo Eizirik, Warren E. Johnson, Ya Ping Zhang, Oliver A. Ryder, and Stephen J. O'Brien
Resolution of the Early Placental Mammal Radiation Using Bayesian Phylogenetics, William J. Murphy, Eduardo Eizirik, Stephen J. O'Brien, Ole Madsen, Mark Scally, Christophe J. Douady, Emma Teeling, Oliver A. Ryder, Michael J. Stanhope, Wilfried W. de Jong, and Mark S. Springer
A Radiation Hybrid Mapping Panel for the Rhesus Macacque, William J. Murphy, J. E. Page, C. Smith Jr., Ronald C. Desrosiers, and Stephen J. O'Brien
Evolution of mammalian genome organization inferred from comparative gene mapping, W. J. Murphy, R. Stanyon, and S. J. O'Brien
The Pattern of Phylogenomic Evolution of the Canidae, William G. Nash, Joan C. Menninger, Johannes Wienberg, Hesed M. Padilla-Nash, and Stephen J. O'Brien
Cell Culture Forensics, Stephen J. O'Brien
On Choosing Mammalian Genomes for Sequencing, Stephen J. O'Brien, Eduardo Eizirik, and William J. Murphy
HLA and AIDS: A Cautionary Tale, Stephen J. O'Brien, Xiaojiang Gao, and Mary Carrington
Rapid and Simultaneous Identification of Body Parts from the Morphologically Similar Sharks Carcharhinus obscurus and Carcharhinus plumbeus (Carcharhinidae) Using Multiplex PCR, Melissa Pank, Michael Stanhope, Lisa Natanson, Nancy Kohler, and Mahmood S. Shivji
Canine and Feline Parvoviruses Can Use Human or Feline Transferrin Receptors to Bind, Enter, and Infect Cells, John S. L. Parker, William J. Murphy, Dai Wang, Stephen J. O'Brien, and Colin R. Parrish
Canine and feline parvoviruses can use human or feline transferrin receptors to bind, enter, and infect cells, J. S.L. Parker, W. J. Murphy, D. Wang, S. J. O'Brien, and C. R. Parrish
A Preliminary Checklist of the Shallow-Water Crinoids of the Kerama Islands, Okinawa, Japan., Nicolas J. Pilcher and Charles G. Messing
Degradation of Reef Structure, Coral and Fish Communities in the Red Sea by Ship Groundings and Dynamite Fisheries, Bernhard Riegl
Inhibition of Reef Framework by Frequent Disturbance: Examples From the Arabian Gulf, South Africa, and the Cayman Islands, Bernhard Riegl
Mapping and Monitoring of Coral Communities and Their Spatial Patterns Using a Surface-Based Video Method from a Vessel, Bernhard Riegl, Jan L. Korrubel, and Charles Martin
Cryptic Tissues Inside Acropora Frameworks (Indonesia): A Mechanism to Enhance Tissue Survival in Hard Times While Also Increasing Framework Density, Bernhard Riegl and Werner Pillar
Soft Coral Mimesis by an Aeolidiid Nudibranch, Bernhard Riegl and Josef Schaffelner
Genetic Evidence for Two Species of Elephant in Africa, Alfred L. Roca, Nicholas Georgiadis, Jill Pecon-Slattery, and Stephen J. O'Brien
Numbers of naked amoebae inhabiting the intertidal zone of two geographically seperate sandy beaches, Andrew Rogerson, Fiona Hannah, Gwen Hauer, and Phillip Cowie
A System for High-Resolution Zooplankton Imaging, Scott Samson, T. L. Hopkins, Andrew Remsen, Lawrence Langebrake, Tracey Sutton, and Jim Patten
rPatterns of mtDNA and Microsatellite Variation in an Island and Mainland Population of Guanacos in Southern Chile, Ronald J. Sarno, William L. Franklin, Stephen J. O'Brien, and Warren E. Johnson
Site-Dependent Differences in Artificial Reef Function: Implications for Coral Reef Restoration, Robin L. Sherman, David S. Gilliam, and Richard E. Spieler
Markers for Mapping by Admixture Linkage Disequilibrium in African American and Hispanic Populations, Michael W. Smith, J. A. Lautenberger, Hyoung Doo Shin, Jean-Paul Chretien, Sadeep Shrestha, Dennis A. Gilbert, and Stephen J. O'Brien
An Approach to Parameterization of the Oceanic Turbulent Boundary Layer in the Western Pacific Warm Pool, Alexander Soloviev, Roger Lukas, and Peter Hacker