CNSO Faculty Articles
Submissions from 2003
Feeding Ecology, Age, Growth and Sexual Cycle of the Portuguese Sole, Synaptura lusitanica, Henrique Cabral, Ana Isabel Catarino, Joana Figueiredo, Joana Garcia, and Miguel Henriques
Genetic and Morphological Variation of Synaptura lusitanica Capello, 1868, along the Portuguese Coast, Henrique Cabral, Joana F. Marques, Ana Luisa Rego, Ana Isabel Catarino, Joana Figueiredo, and Joana Garcia
The Influence of HLA Genotype on AIDS, Mary Carrington and Stephen J. O'Brien
Diel Movement Patterns of the Hawaiian Stingray, Dasyatis Lata: Implications for Ecological Interactions between Sympatric Elasmobranch Species, Daniel P. Cartamil, Jeremy Vaudo, Christopher G. Lowe, Bradley M. Wetherbee, and Kim N. Holland
A Streamlined, Bi-Organelle, Multiplex PCR Approach to Species Identification: Application to Global Conservation and Trade Monitoring of the Great White Shark, Carcharodon carcharias, Demian D. Chapman, Debra Abercrombie, Christophe J. Douady, Ellen K. Pikitch, Michael Stanhope, and Mahmood S. Shivji
Mating Behavior of Southern Stingrays, Dasyatis americana (Dasyatidae), Demian D. Chapman, Mark John Corcoran, Guy Harvey, Sonita Malan, and Mahmood S. Shivji
Non-Hodgkin's B Cell Lymphoma in Persons with Acquired Immunodeficiency Syndrome is Associated with Increased Serum Levels of IL10, or the IL10 Promoter −592 C/C Genotype, Elizabeth Crabb Breen, W. John Boscardin, Roger Detels, Lisa Jacobson, Michael W. Smith, Stephen J. O'Brien, Joan S. Chmiel, Charles Rinaldo, Shenghan Lai, and Otoniel Martinez-Maza
Safety Issues in Cell-Based Intervention Trials, Liza Dawson, Alison S. Bateman-House, Dawn Mueller Agnew, Hilary Bok, Dan W. Brock, Aravinda Chakravarti, Mark Greene, Patricia A. King, Stephen J. O'Brien, David H. Sachs, Kathryn E. Schill, Andrew Siegel, Davor Solter, Sonia M. Suter, Catherine M. Verfaillie, LeRoy B. Walters, John Gearhart, and Ruth R. Faden
Histidine-Decarboxylase Knockout Mice Show Deficient Nonreinforced Episodic Object Memory, Improved Negatively Reinforced Water-Maze Performance, and Increased Neo- and Ventro-Striatal Dopamine Turnover, Ekrem Dere, Maria A. De Souza-Silva, Bianca Topic, Richard E. Spieler, Helmut L. Haas, and Joseph P. Huston
Molecular Phylogenetic Evidence Refuting the Hypothesis of Batoidea (Rays and Skates) as Derived Sharks, C. J. Douady, Mine Dosay, Mahmood S. Shivji, and Michael Stanhope
Genetic Influence of CXCR6 Chemokine Receptor Alleles on PCP-Mediated AIDS Progression Among African Americans, Priya Duggal, P. An, T. H. Beaty, Steffanie A. Strathdee, H. Farzadegan, R. D. Markham, L. Johnson, Stephen J. O'Brien, David Vlahov, and Cheryl Winkler
Molecular Genetics and Evolution of Melanism in the Cat Family, Eduardo Eizirik, Naoya Yuhki, Warren E. Johnson, Marilyn Menotti-Raymond, Steven S. Hannah, and Stephen J. O'Brien
Structural Studies of Lanthanide and Yttrium Metallocene Oxides, William J. Evans, Benjamin L. Davis, Gregory W. Nyce, Jeremy M. Perotti, and Joseph W. Ziller
Polymerization of Isoprene by a Single Component Lanthanide Catalyst Precursor, William J. Evans, Dimitri Giarikos, and Nathan T. Allen
Synthesis and Structure of Polymeric Networks of Silver Hexafluoroacetylacetonate Complexes of THF, Toluene, and Vinyltrimethylsilane, William J. Evans, Dimitri Giarikos, Daniel Josell, and Joseph W. Ziller
Synthesis and Reactivity of a Tethered Diene Cyclopentadiene, (C5Me4H)SiMe2(CH2CH=CHCH=CH2), and Its Alkali Metal Salts, William J. Evans, Dimitri Giarikos, and Joseph W. Ziller
Tethered Olefin Studies of Alkene versus Tetraphenylborate Coordination and Lanthanide Olefin Interactions in Metallocenes, William J. Evans, Jeremy M. Perotti, Jason C. Brady, and Joseph W. Ziller
Evaluation of a Silyene Divalent Lanthanide Interaction in the Metallocene Complex, (C5Me5)2Sm[SiNtBuCHCHNtBu], William J. Evans, Jeremy M. Perotti, Joseph W. Ziller, Daniel F. Moser, and Robert West
Public Stem Cell Banks: Considerations of Justice in Stem Cell Research and Therapy, Ruth R. Faden, Liza Dawson, Alison S. Bateman-House, Dawn Mueller Agnew, Hilary Bok, Dan W. Brock, Aravinda Chakravarti, Xiaojiang Gao, Mark Greene, Patricia A. King, Stephen J. O'Brien, David H. Sachs, Kathryn E. Schill, Andrew Siegel, Davor Solter, Sonia M. Suter, Catherine M. Verfaillie, LeRoy B. Walters, and John Gearhart
A Rapid Assessment of Coral Reefs Near Hopetown, Abaco Islands, Bahamas (Stony Corals and Algae), Joshua Feingold, Susan L. Thornton, Kenneth W. Banks, Nancy J. Gasman, David S. Gilliam, Pamela Fletcher, and Christian L. Avila
Case 3270: Isometrinae Clark, 1917 (Ecinodermata, Crinoidea): Proposed Emendation of Spelling to Isometrainae to Remove Homonymy with Isometrinae Kraepelin, 1891 (Arachnida, Scorpiones), Victor Fet and Charles G. Messing
Benthic Habitat Mapping in the Tortugas Region, Florida, E. Franklin, Jerald Ault, Steven G. Smith, Jiangang Luo, G. Meester, Guillermo A. Diaz, Mark Chiappone, Dione W. Swanson, Steven Miller, and James A. Bohnsack
Effects of Light Adaptation on the Temporal Resolution of Deep-sea Crustaceans, Tamara M. Frank
Water-Soluble Organic Components in Aerosols Associated with Savanna Fires in Southern Africa: Identification, Evolution, and Distribution, Song Gao, Dean A. Hegg, Peter V. Hobbs, Thomas W. Kirchstetter, Brian I. Magi, and Martin Sadilek
Aerosol Chemistry, and Light-Scattering and Hygroscopicity Budgets during Outflow from East Asia, Song Gao, Dean A. Hegg, and Haflidi Jonsson
Growth and Survivorship of Stony Coral Meandrina meandrites and Montastrea cavernosa Transplants to an Artificial Reef Environment: A Work in Progress, E. A. Glynn, T. Patrick Quinn, Daniel P. Fahy, Richard E. Dodge, David S. Gilliam, and Richard E. Spieler
On the Formation of Persistent States in Neuronal Network Models of Feature Selectivity, Evan Haskell and Paul C. Bressloff
CoralXDS - Coral X-radiograph Densitometry System, Kevin P. Helmle, Kevin E. Kohler, and Richard E. Dodge
Evolution of Gases and Particles from a Savanna Fire in South Africa, Peter V. Hobbs, Parikhit Sinha, Robert J. Yokelson, Ted J. Christian, Donald R. Blake, Song Gao, Thomas W. Kirchstetter, Tihomir Novakov, and Peter Pilewskie
Assessment of the Coral Reefs of the Turks and Caicos Islands (Part 2: Fish Communities), Kaho Hoshino, Marilyn Brandt, Carrie Manfrino, Bernhard Riegl, and Sascha C. C. Steiner
3D Nonrigid Motion Analysis Under Small Deformations, Chandra Kambhamettu, Dmitry Goldgof, Matthew He, and Pavel Laskov
UV and Optical Spectral Properties in Early-Type Galaxies, Stefan Kautsch and Werner W. Zeilinger
Foraging by the Mud Snail, Ilyanassa obsoleta (Say), Modulates Spatial Variation in Benthic Community Structure, Brendan P. Kelaher, Jeffrey S. Levinton, and J. Matthew Hoch
Reviewed Work(s): Electronic Tagging and Tracking in Marine Fisheries., David W. Kerstetter
Use of Pop-up Satellite Archival Tags to Demonstrate Survival of Blue Marlin (Makaira nigricans) Released from Pelagic Longline Gear, David W. Kerstetter, Brian E. Luckhurst, Eric Prince, and John E. Graves
An Annotated Checklist and Key to the Crinoidea of Guam and the Commonwealth of the Northern Marianas Islands, Lisa Kirkendale and Charles G. Messing
Mapping of 53 Loci in American Mink (Mustela vison), S. B. Kuznetsov, N. M. Matveeva, William J. Murphy, Stephen J. O'Brien, and O. L. Serov
Access of antibody molecules to the conserved coreceptor binding site on glycoprotein gp120 is sterically restricted on primary human immunodeficiency virus type 1, A. F. Labrijn, P. Poignard, Aarti Raja, M. B. Zwick, K. Delgado, M. Franti, J. Binley, V. Vivona, C. Grundner, C. C. Huang, M. Venturi, C. J. Petropoulos, T. Wrin, D. S. Dimitroy, J. Robinson, P. D. Kwong, R. T. Wyatt, J. Sodroski, and D. R. Burton
Episodic Nutrient Transport to Florida Coral Reefs, James J. Leichter, Hannah L. Stewart, and Steven Miller
Automated Single-Strand Conformation Polymorphism Reveals Low Diversity of a Major Histocompatibility Complex Class II Gene in the Threatened New Zealand Sea Lion, G. M. Lento, C. S. Baker, Victor David, Naoya Yuhki, N. J. Gales, and Stephen J. O'Brien
Association of Polymorphisms in Human Leukocyte Antigen Class I and Transporter Associated with Antigen Processing Genes with Resistance to Human Immunodeficiency Virus Type 1 Infection, Chenglong Liu, Mary Carrington, Richard A. Kaslow, Xiaojiang Gao, Charles Rinaldo, Lisa Jacobson, Joseph Margolick, John Phair, Stephen J. O'Brien, and Roger Detels
Status of Coral Reefs of Little Cayman, Grand Cayman and Cayman Brac, British West Indies, in 1999 and 2000 (Part 1: Stony Corals and Algae), Carrie Manfrino, Bernhard Riegl, Jerome L. Hall, and Robert Graifman
Radiation Hybrid Mapping of 304 Novel Microsatellites in the Domestic Cat Genome, Marilyn Menotti-Raymond, V. A. David, R. Agarwala, Alejandro A. Schaffer, R. Stephens, Stephen J. O'Brien, and W. J. Murphy
Second-Generation Integrated Genetic Linkage/Radiation Hybrid Maps of the Domestic Cat (Felis catus), Marilyn Menotti-Raymond, V. A. David, Z. Q. Chen, K. A. Menotti, S. Sun, Alejandro A. Schaffer, R. Agarwala, James F. Tomlin, Stephen J. O'Brien, and William J. Murphy
Quantitative Polymerase Chain Reaction-based Assay for Estimating DNA Yield Extracted from Domestic Cat Specimens, Marilyn Menotti-Raymond, Victor David, Leslie Wachter, Naoya Yuhki, and Stephen J. O'Brien
Three New Species of Comasteridae Echinodermata, Crinoidea from the Tropical Western Pacific, Charles G. Messing
Unique Morphology in the Living Bathyal Feather Star, Atelecrinus (Echinodermata: Crinoidea), Charles G. Messing
MCP-1-MCP-3–Eotaxin Gene Cluster Influences HIV-1 Transmission, William Modi, James J. Goedert, Steffanie A. Strathdee, Susan Buchbinder, Roger Detels, Sharyne Donfield, Stephen J. O'Brien, and Cheryl Winkler
Haplotype Diversity in the Interleukin-4 Gene is Not Associated with HIV-1 transmission and AIDS Progression, William Modi, Thomas R. O'Brien, David Vlahov, Susan Buchbinder, Edward Gomperts, John Phair, Stephen J. O'Brien, and Cheryl Winkler
Pavements of Siderastrea radians on Cape Verde Reefs, Chris S. Moses, Kevin P. Helmle, Peter K. Swart, Richard E. Dodge, and S. E. Merino
Spatial Patterns and Ecology of Benthic Communities on a High-Latitude South Florida (Broward County, USA) Reef System, Ryan P. Moyer, Bernhard Riegl, Kenneth Banks, and Richard E. Dodge
Reconstructing the Genomic Architecture of Mammalian Ancestors Using Multispecies Comparative Maps, William J. Murphy, Guillaume Bourque, Glenn Tesler, Pavel Pevzner, and Stephen J. O'Brien
The Origin of Human Chromosome 1 and its Homologs in Placental Mammals, William J. Murphy, Lutz Fronicke, Stephen J. O'Brien, and Roscoe Stanyon
Disorder Characterization of Oxide/Silicon Interfaces from I-V Curves, Louis R. Nemzer and Fredy R. Zypman
A Dog's Breakfast?, Stephen J. O'Brien and William J. Murphy
Vertical Versus Horizontal Growth Strategies of Coral Frameworks (Tulamben, Bali, Indonesia), W. E. Piller and Bernhard Riegl
Hypothesis-based Restoration Study For Mitigation of a Damaged SE Florida Coral Reef: A Work in Progress, T. Patrick Quinn, E. A. Glynn, Richard E. Dodge, Kenneth Banks, L. E. Fisher, and Richard E. Spieler
Interaction of HIV reverse transcriptase with structures mimicking recombination intermediates, Aarti Raja, J. Jeffrey, and J. J. DeStefano
Daptomycin. Fresh from the Pipeline, Aarti Raja, J. LaBonte, J. Lebbos, and P. Kirkpatrick
Atazanavir Sulfate. Fresh from the Pipeline, Aarti Raja, J. Lebbos, and P. Kirkpatrick
CD4 binding site antibodies inhibit human immunodeficiency virus (HIV-1) gp120 envelope glycoprotein interaction with CCR5, Aarti Raja, Venturi Miro, Kwong Peter, and J. Sodroski
Climate Change and Coral Reefs: Different Effects in Two High-Latitude Areas (Arabian Gulf, South Africa), Bernhard Riegl
Halofolliculina Skeleton Eroding Band (SEB): A Coral Disease with Fossilization Potential?, Bernhard Riegl and Arnfried Antonius
Assessment of the Coral Reefs of the Turks and Caicos Islands (Part 1: Stony Corals and Algae), Bernhard Riegl, Carrie Manfrino, Casey Hermoyian, Marilyn Brandt, and Kaho Hoshino
Possible Refugia for Reefs in Times of Environmental Stress, Bernhard Riegl and Werner Piller
Emissions of Trace Gases and Particles From Savanna Fires in Southern Africa, Parikhit Sinha, Peter V. Hobbs, Robert J. Yokelson, Isaac T. Bertschi, Donald R. Blake, Isobel J. Simpson, Song Gao, Thomas W. Kirchstetter, and Tihomir Novakov
Distributions of Trace Gases and Aerosols During the Dry Biomass Burning Season in Southern Africa, Parikhit Sinha, Peter V. Hobbs, Robert J. Yokelson, Donald R. Blake, Song Gao, and Thomas W. Kirchstetter
Polyketide Synthase Genes from Marine Dinoflagellates, R. V. Snyder, P. D. L. Gibbs, A. Palacios, L. Abiy, R. Dickey, Jose V. Lopez, and K. S. Rein
Observation of Wave-Enhanced Turbulence in the Near-Surface Layer of the Ocean During TOGA COARE, Alexander Soloviev and Roger Lukas
Energetic Baroclinic Super-Tidal Oscillations on the Southeast Florida shelf, Alexander Soloviev, Mark E. Luther, and Robert H. Weisberg
Coastal Observatory Investigates Energetic Current Oscillations on Southeast Florida Shelf, Alexander Soloviev, Rebekah J. Walker, Robert H. Weisberg, and Mark E. Luther
Placental Mammal Diversification and the Cretaceous-Tertiary Boundary, Mark S. Springer, William J. Murphy, Eduardo Eizirik, and Stephen J. O'Brien
Structural rRNA Characters Support Monophyly of Raptorial Limbs and Paraphyly of Limb Specialization in Water Fleas, Timothy D. Swain and Derek J. Taylor
Reproductive Status of Endemic Felid Species in Latin American Zoos and Implications for Ex Situ Conservation, William Swanson, Warren E. Johnson, Richard Cambre, S. Citino, K. B. Quigley, Dulce Brousset, R. N. Morais, N. Moreira, Stephen J. O'Brien, and David E. Wildt
Genetic Variation of the Scleractinian Coral Stylophora pistillata, from Western Pacific Reefs, M. Takabayashi, D. Carter, Jose V. Lopez, and O. Hoegh-Guldberg
Incertae sedis no more: the phylogenetic affinity of Helicosporidia, Aurelien Tartar and D. G. Bouncias
Comparison of plastid 16S rDNA (rrn16) genes from Helicosporidium spp.: evidence supporting the reclassification of Helicosporidia as green algae (Chlorophyta), Aurelien Tartar, Drion G. Bouncias, James J. Becnel, and Byron J. Adams
Nuclear Gene Sequences Confirm an Ancient Link Between New Zealand's Short-Tailed Bat and South American Noctilionoid Bats, Emma C. Teeling, Ole Madsen, William J. Murphy, Mark S. Springer, and Stephen J. O'Brien
Comprehensive Analysis of Class I and Class II HLA Antigens and Chronic Hepatitis B Virus Infection, Chloe L. Thio, David L. Thomas, Peter Karacki, Xiaojiang Gao, Darlene Marti, Richard A. Kaslow, James J. Goedert, Margaret Hilgartner, Steffanie A. Strathdee, Priya Duggal, Stephen J. O'Brien, Jacquie Astemborski, and Mary Carrington
Applying Molecular Genetic Tools to the Conservation and Action Plan for the Critically Endangered Far Eastern Leopard (Panthera pardus orientalis), Olga Uphyrkina and Stephen J. O'Brien
High-Latitude Acropora cervicornis Thickets Off Fort Lauderdale, Florida, USA, Bernardo Vargas-Ángel, James Darwin Thomas, and S. Michael Hoke
SFOMC: A successful navy and academic partnership providing sustained ocean observation capabilities in the Florida straits, William Venezia, William Baxley, Peter Tatro, Manhar Dhanak, Rick Driscoll, Pierre Philippe Beaujean, Steven Shock, Stewart Glegg, Edgar An, Mark Luther, Bob Weisberg, Harry DeFerrari, Neil Williams, Hien Nguyen, Nick Shay, John Van Leer, Richard Dodge, Dave Gilliam, Alexander Soloviev, Shirley Pomponi, Michael Crane, and Kevin Carter
Phytoplankton Response to Intrusions of Slope Water on the West Florida Shelf: Models and Observations, John J. Walsh, Robert H. Weisberg, Dwight A. Dieterle, Ruoying He, Brian P. Darrow, Jason K. Jolliff, Kristen M. Lester, Gabriel A. Vargo, Gary J. Kirkpatrick, Kent A. Fanning, Tracey Sutton, Ann E. Jochens, Douglas C. Biggs, Bisman Nababan, Chuanmin Hu, and Frank E. Muller-Karger
Comparative Genome Organization of Human, Murine, and Feline MHC Class II Region, Naoya Yuhki, Thomas W. Beck, Robert M. Stephens, Yoko Nishigaki, Kymberly Newmann, and Stephen J. O'Brien
Submissions from 2002
Special Issue of Coral Reefs, on Remote Sensing of Coral Reefs, Serge Andrefouet and Bernhard Riegl
Modulating Influence on HIV/Aids by Interacting RANTES Gene Variants, Ping An, George W. Nelson, Lihua Wang, Sharyne Donfield, James J. Goedert, John Phair, David Vlahov, Susan Buchbinder, William L. Farrar, William Modi, Stephen J. O'Brien, and Cheryl Winkler
Feline Immunodeficiency Virus Integration in B-Cell Lymphoma Identifies a Candidate Tumor Suppressor Gene on Human Chromosome 15q151, Julia Beatty, Anne Terry, Julie MacDonald, Elizabeth Gault, Stanley Cevario, Stephen J. O'Brien, Ewan Cameron, and James C. Neil
Characteristics of Shark Bycatch Observed on Pelagic Longlines Off the Southeastern United States, 1992-2000, Lawrence R. Beerkircher, Enric Cortes, and Mahmood S. Shivji
Skeletal Morphology and Material Properties of a Fragmenting Gorgonian Coral, M. L. Boller, Timothy D. Swain, and H. R. Lasker
On Quadrature Rules Associated with Appell Polynomials, Gabriella Bretti, Matthew He, and Paolo E. Ricci
The MeowPlex: A New DNA Test Using Tetranucleotide STR Markers for the Domestic Cat, John M. Butler, Victor A. David, Stephen J. O'Brien, and Marilyn Menotti-Raymond
Density, Spatial Distribution and Size Structure of Sea Urchins in Florida Keys Coral Reef and Hard-Bottom Habitats, Mark Chiappone, Dione W. Swanson, and Steven Miller
Large-Scale Surveys on the Florida Reef Tract Indicate Poor Recovery of the Long-Spined Sea Urchin Diadema antillarum, Mark Chiappone, Dione W. Swanson, Steven Miller, and S. G. Smith
Occurrence and Biological Impacts of Fishing Gear and Other Marine Debris in the Florida Keys, Mark Chiappone, A. White, Dione W. Swanson, and Steven Miller
Patterns of Molecular Genetic Variation Among African Elephant Populations, Kenine E. Comstock, Nicholas Georgiadis, Jill Pecon-Slattery, Alfred L. Roca, Elaine A. Ostrander, Stephen J. O'Brien, and Samuel K. Wasser
Mmu 16- Comparative Genomic Highlights, Neal G. Copeland, Nancy A. Jenkins, and Stephen J. O'Brien
Balanced Polymorphism Selected by Genetic Versus Infectious Human Disease, Michael Dean, Mary Carrington, and Stephen J. O'Brien
Genomic Microsatellites as Evolutionary Chronometers: A Test in Wild Cats, Carlos A. Driscoll, Marilyn Menotti-Raymond, George Nelson, David Goldstein, and Stephen J. O'Brien
The Bent Metallocene Geometries of Potassium Peralkyl Cyclopentadienyl THF Solvates: Monosolvated [(THF)K(µ-C5Me5)]n, Disolvated [(THF)2K(µ-C5Me5)]n and the Tethered Olefin Complex [(THF)K(μ-C5Me4SiMe2CH2CH=CH2)]n, William J. Evans, Jason C. Brady, Cy H. Fujimoto, Dimitri Giarikos, and Joseph W. Ziller
Direct Synthesis of Heterometallic Europium/Barium Complexes: H2[Eu2Ba6O2(OiPr)16(THF)4] and EuBa2(OC6H4Me-4)7(diglyme)2(DME), William J. Evans, Dimitri Giarikos, Michael A. Greci, and Joseph W. Ziller