Title

Decontamination and Annotation of the Draft Genome Sequence of the Oomycete Lagenidium giganteum ARSEF 373

Authors

William R. Morgan, The College of Wooster
Aurelien Tartar, Nova Southeastern UniversityFollow

Document Type

Article

Publication Date

4-13-2023

Publication Title

Microbiology Resource Announcements

ISSN

2576-098X

Volume

12

Issue/No.

5

Abstract

Scaffolds of a previously published Lagenidium giganteum ARSEF 373 genome assembly found at GenBank were filtered to remove contaminating sequences. Genome annotation of the 437 scaffolds (total length, 56.2 MB; GC content, 58.8%) with confirmed L. giganteum sequences identified 13,069 potential protein-coding genes, encoding at least 737 predicted secreted proteins and .100 putative translocated effectors

Comments

© 2023 Morgan and Tartar.

This research was supported in part by a grant from the U.S. Department of Agriculture (Agriculture and Food Research Initiative 2011-68004-30104) and the Theron L. Peterson and Dorothy R. Peterson Biology Research Fund (College of Wooster).

Creative Commons License

This work is licensed under a Creative Commons Attribution 4.0 International License.

NSUWorks Citation

Morgan, William R. and Aurelien Tartar. 2023. "Decontamination and Annotation of the Draft Genome Sequence of the Oomycete Lagenidium giganteum ARSEF 373." Microbiology Resource Announcements 12, (5). doi:10.1128/mra.01346-22.

DOI

10.1128/mra.01346-22