Potential Impacts of Environmental Bacteria on the Microbiota of Loggerhead (Caretta caretta) and Green (Chelonia mydas) Sea Turtle Eggs and Their Hatching Success, Colleen McMaken, Derek Burkholder, Rosanna J. Milligan Dr., Jose V. Lopez
Jose Lopez

Potential Impacts of Environmental Bacteria on the Microbiota of Loggerhead (Caretta caretta) and Green (Chelonia mydas) Sea Turtle Eggs and Their Hatching Success, Colleen McMaken, Derek Burkholder, Rosanna J. Milligan Dr., Jose V. Lopez
Biology Faculty Articles

Morphological and Transcriptional Effects of Crude Oil and Dispersant Exposure on the Marine Sponge Cinachyrella Alloclada, Yvain Desplat, Jacob F. Warner, Emily J. Blake, Nidhi Vijayan, Marie Cuvelier, Patricia Blackwelder, Jose V. Lopez
Biology Faculty Articles

Morphological and transcriptional effects of crude oil and dispersant exposure on the marine sponge Cinachyrella alloclada, Yvain Desplat, Jacob F. Warner, Emily J. Blake, Nidhi Vijayan, Marie Cuvelier, Patricia Blackwelder, Jose V. Lopez
Jose Lopez

Change and stasis of distinct sediment microbiomes across Port Everglades Inlet (PEI) and the adjacent coral reefs, Lauren E. Krausfeldt, Jose V. Lopez, Catherine Bilodeau, Hyo Won Lee, Shelby L. Casali
Biology Faculty Articles

Change and stasis of distinct sediment microbiomes across Port Everglades Inlet (PEI) and the adjacent coral reefs, Lauren E. Krausfeldt, Jose V. Lopez, Catherine Bilodeau, Hyo Won Lee, Shelby L. Casali
Jose Lopez

Three complete mitochondrial genomes of shortfin mako sharks, Isurus oxyrinchus, from the Atlantic and Pacific Oceans, Marissa Mehlrose, Andrea Bernard, Kimberly A. Finnegan, Lauren E. Krausfeldt, Jose V. Lopez, Mahmood Shivji
Jose Lopez

Nitrosomonas supralitoralis sp. nov., an ammonia-oxidizing bacterium from beach sand in a supralittoral zone, Hidetoshi Urakawa, Gabrianna A. Andrews, Jose V. Lopez, Willm Martens-Habbena, Martin G. Klotz, David A. Stahl
Jose Lopez

Why and How to Sequence All Eukaryotic Genomes on the Planet, Jose V. Lopez
Jose Lopez

Three complete mitochondrial genomes of shortfin mako sharks, Isurus oxyrinchus, from the Atlantic and Pacific Oceans, Marissa Mehlrose, Andrea Bernard, Kimberly A. Finnegan, Lauren E. Krausfeldt, Jose V. Lopez, Mahmood Shivji
Andrea Bernard

Nitrosomonas supralitoralis sp. nov., an ammonia-oxidizing bacterium from beach sand in a supralittoral zone, Hidetoshi Urakawa, Gabrianna A. Andrews, Jose V. Lopez, Willm Martens-Habbena, Martin G. Klotz, David A. Stahl
Biology Faculty Articles

Three complete mitochondrial genomes of shortfin mako sharks, Isurus oxyrinchus, from the Atlantic and Pacific Oceans, Marissa Mehlrose, Andrea Bernard, Kimberly A. Finnegan, Lauren E. Krausfeldt, Jose V. Lopez, Mahmood Shivji
Mahmood Shivji

Holo-Transcriptome Sequences from the Tropical Marine Sponge Cinachyrella alloclada, Yvain Desplat, Jacob F. Warner, Jose V. Lopez
Jose Lopez

The Earth BioGenome Project 2020: Starting the clock, Harris A. Lewin, Stephen Richards, Erez Lieberman Aiden, Miguel L. Allende, John M. Archibald, Katharine B. Baker, Bridget Baumgartner, Katherine Belov, Giorgio Bertorelle, Mark L. Blaxter, Jing Cai, Nicolette D. Caperello, Keith Carlson, Juan Carlos Castilla-Rubio, Shu-Miaw Chaw, Lei Chen, Anna K. Childers, Jonathan A. Coddington, Dalia A. Conde, Montserrat Corominas, Keith A. Crandall, Andrew J. Crawford, Federica DiPalma, Richard Durbin, ThankGod E. Ebenezer, Scott V. Edwards, Olivier Fedrigo, Paul Flicek, Giulio Formenti, Richard A. Gibbs, M. Thomas P. Gilbert, Melissa M. Goldstein, Jennifer Marshall Graves, Henry T. Greely, Igor V. Grigoriev, Kevin J. Hackett, Neil Hall, David Haussler, Kristofer M. Helgen, Carolyn J. Hogg, Sachiko Isobe, Kjetill Sigurd Jakobson, Axel Janke, Erich D. Jarvis, Warren E. Johnson, Steven J. M. Jones, Elinor K. Karlsson, Paul J. Kersey, Jin-Hyoung Kim, W. John Kress, Shigehiro Kuraku, Mara K. N. Lawniczak, James H. Leebens-Mack, Xueyan Li, Kerstin Lindblad-Toh, Xin Liu, Jose V. Lopez, Tomas Marques-Bonet, Sophie Mazard, Jonna A. K. Mazet, Camila J. Mazzoni, Eugene W. Myers, Rachel J. O'Neill, Sadye Paez, Hyun Park, Gene E. Robinson, Cristina Roquet, Oliver A. Ryder, Jamal S. M. Sabir, H. Bradley Shaffer, Timothy M. Shank, Jacob S. Sherkow, Pamela S. Soltis, Boping Tang, Leho Tedersoo, Marcela Uliano-Silva, Kun Wang, Xiaofeng Wei, Regina Wetzer, Julia L. Wilson, Xun Xu, Huanming Yang, Anne D. Yoder, Guojie Zhang
Jose Lopez

Standards recommendations for the Earth BioGenome Project, Mara K. Lawniczak, Richard Durbin, Paul Flicek, Kerstin Lindblad-Toh, Xiaofeng Wei, John M. Archibald, William J. Baker, Katherine Belov, Mark L. Blaxter, Tomas Marques-Bonet, Anna K. Childers, Jonathan A. Coddington, Keith A. Crandall, Andrew J. Crawford, Robert P. Davey, Federica Di Palma, Qi Fang, Wilfried Haerty, Neil Hall, Katherine J. Hoff, Kerstin Howe, Erich D. Jarvis, Warren E. Johnson, Rebecca N. Johnson, Paul J. Kersey, Xin Liu, Jose V. Lopez, Eugene W. Myers, Olga Vinnere Pettersson, Adam M. Phillippy, Monica F. Poelchau, Kim D. Pruitt, Arang Rhie, Juan Carlos Castilla-Rubio, Sunil Kumar Sahu, Nicholas A. Salmon, Pamela S. Soltis, David Swarbreck, Françoise Thibaud-Nissen, Sibo Wang, Jill L. Wegrzyn, Guojie Zhang, He Zhang, Harris A. Lewin, Stephen Richards
Jose Lopez

Why sequence all eukaryotes?, Mark Blaxter, John M. Archibald, Anna K. Childers, Jonathan A. Coddington, Keith A. Crandall, Federica Di Palma, Richard Durbin, Scott V. Edwards, Jennifer A.M. Graves, Kevin J. Hackett, Neil Hall, Erich D. Jarvis, Rebecca N. Johnson, Elinor K. Karlsson, W. John Kress, Shigehiro Kuraku, Mara K. N. Lawniczak, Kerstin Lindblad-Toh, Jose V. Lopez, Nancy A. Moran, Gene E. Robinson, Oliver A. Ryder, Beth Shapiro, Pamela S. Soltis, Tandy Warnow, Guojie Zhang, Harris A. Lewin
Jose Lopez

Why and How to Sequence All Eukaryotic Genomes on the Planet, Jose V. Lopez, EarthBioGenome
HCAS Ocean Science Research Symposium

Closing Statements, Jose V. Lopez
HCAS Ocean Science Research Symposium

Standards recommendations for the Earth BioGenome Project, Mara K. Lawniczak, Richard Durbin, Paul Flicek, Kerstin Lindblad-Toh, Xiaofeng Wei, John M. Archibald, William J. Baker, Katherine Belov, Mark L. Blaxter, Tomas Marques-Bonet, Anna K. Childers, Jonathan A. Coddington, Keith A. Crandall, Andrew J. Crawford, Robert P. Davey, Federica Di Palma, Qi Fang, Wilfried Haerty, Neil Hall, Katherine J. Hoff, Kerstin Howe, Erich D. Jarvis, Warren E. Johnson, Rebecca N. Johnson, Paul J. Kersey, Xin Liu, Jose V. Lopez, Eugene W. Myers, Olga Vinnere Pettersson, Adam M. Phillippy, Monica F. Poelchau, Kim D. Pruitt, Arang Rhie, Juan Carlos Castilla-Rubio, Sunil Kumar Sahu, Nicholas A. Salmon, Pamela S. Soltis, David Swarbreck, Françoise Thibaud-Nissen, Sibo Wang, Jill L. Wegrzyn, Guojie Zhang, He Zhang, Harris A. Lewin, Stephen Richards
Biology Faculty Articles

The Earth BioGenome Project 2020: Starting the clock, Harris A. Lewin, Stephen Richards, Erez Lieberman Aiden, Miguel L. Allende, John M. Archibald, Katharine B. Baker, Bridget Baumgartner, Katherine Belov, Giorgio Bertorelle, Mark L. Blaxter, Jing Cai, Nicolette D. Caperello, Keith Carlson, Juan Carlos Castilla-Rubio, Shu-Miaw Chaw, Lei Chen, Anna K. Childers, Jonathan A. Coddington, Dalia A. Conde, Montserrat Corominas, Keith A. Crandall, Andrew J. Crawford, Federica DiPalma, Richard Durbin, ThankGod E. Ebenezer, Scott V. Edwards, Olivier Fedrigo, Paul Flicek, Giulio Formenti, Richard A. Gibbs, M. Thomas P. Gilbert, Melissa M. Goldstein, Jennifer Marshall Graves, Henry T. Greely, Igor V. Grigoriev, Kevin J. Hackett, Neil Hall, David Haussler, Kristofer M. Helgen, Carolyn J. Hogg, Sachiko Isobe, Kjetill Sigurd Jakobson, Axel Janke, Erich D. Jarvis, Warren E. Johnson, Steven J. M. Jones, Elinor K. Karlsson, Paul J. Kersey, Jin-Hyoung Kim, W. John Kress, Shigehiro Kuraku, Mara K. N. Lawniczak, James H. Leebens-Mack, Xueyan Li, Kerstin Lindblad-Toh, Xin Liu, Jose V. Lopez, Tomas Marques-Bonet, Sophie Mazard, Jonna A. K. Mazet, Camila J. Mazzoni, Eugene W. Myers, Rachel J. O'Neill, Sadye Paez, Hyun Park, Gene E. Robinson, Cristina Roquet, Oliver A. Ryder, Jamal S. M. Sabir, H. Bradley Shaffer, Timothy M. Shank, Jacob S. Sherkow, Pamela S. Soltis, Boping Tang, Leho Tedersoo, Marcela Uliano-Silva, Kun Wang, Xiaofeng Wei, Regina Wetzer, Julia L. Wilson, Xun Xu, Huanming Yang, Anne D. Yoder, Guojie Zhang
Biology Faculty Articles

Why sequence all eukaryotes?, Mark Blaxter, John M. Archibald, Anna K. Childers, Jonathan A. Coddington, Keith A. Crandall, Federica Di Palma, Richard Durbin, Scott V. Edwards, Jennifer A.M. Graves, Kevin J. Hackett, Neil Hall, Erich D. Jarvis, Rebecca N. Johnson, Elinor K. Karlsson, W. John Kress, Shigehiro Kuraku, Mara K. N. Lawniczak, Kerstin Lindblad-Toh, Jose V. Lopez, Nancy A. Moran, Gene E. Robinson, Oliver A. Ryder, Beth Shapiro, Pamela S. Soltis, Tandy Warnow, Guojie Zhang, Harris A. Lewin
Biology Faculty Articles

Three complete mitochondrial genomes of shortfin mako sharks, Isurus oxyrinchus, from the Atlantic and Pacific Oceans, Marissa Mehlrose, Andrea Bernard, Kimberly A. Finnegan, Lauren E. Krausfeldt, Jose V. Lopez, Mahmood Shivji
Biology Faculty Articles

Holo-Transcriptome Sequences from the Tropical Marine Sponge Cinachyrella alloclada, Yvain Desplat, Jacob F. Warner, Jose V. Lopez
Biology Faculty Articles

Complete mitogenome sequences of smooth hammerhead sharks, Sphyrna zygaena, from the eastern and western Atlantic, Derek S. Guy, Cassandra L. Ruck, Jose V. Lopez, Mahmood S. Shivji
Jose Lopez

Combined eDNA and Acoustic Analysis Reflects Diel Vertical Migration of Mixed Consortia in the Gulf of Mexico, Cole G. Easson, Kevin M. Boswell, Nicholas Tucker, Joseph D. Warren, Jose V. Lopez
Jose Lopez

Complete genome sequence of microcystis aeruginosa FD4, isolated from a subtropical river in Southwest Florida, Hidetoshi Urakawa, Taylor L. Hancock, Jacob H. Steele, Elizabeth K. Dahedl, Haruka E. Urakawa, Luka K. Ndungu, Lauren E. Krausfeldt, Barry H. Rosen, Jose V. Lopez
Jose Lopez

Complete mitogenome sequences of smooth hammerhead sharks, Sphyrna zygaena, from the eastern and western Atlantic, Derek S. Guy, Cassandra L. Ruck, Jose V. Lopez, Mahmood S. Shivji
Mahmood Shivji

ddPCR Reveals SARS-CoV-2 Variants in Florida Wastewater, Eben Gering, Jacob Colbert, Sarah Schmedes, George Duncan, Jose V. Lopez, Jessy Motes, James Weiss, Taj Azarian, Omer Tekin, Jason Blanton
Eben Gering

ddPCR Reveals SARS-CoV-2 Variants in Florida Wastewater, Eben Gering, Jacob Colbert, Sarah Schmedes, George Duncan, Jose V. Lopez, Jessy Motes, James Weiss, Taj Azarian, Omer Tekin, Jason Blanton
Jose Lopez

ddPCR Reveals SARS-CoV-2 Variants in Florida Wastewater, Eben Gering, Jacob Colbert, Sarah Schmedes, George Duncan, Jose V. Lopez, Jessy Motes, James Weiss, Taj Azarian, Omer Tekin, Jason Blanton
George Duncan

Microbiome Analyses Demonstrate Specific Communities Within Five Shark Species, Rachael Storo, Cole Easson, Mahmood S. Shivji, Jose V. Lopez
Jose Lopez

Microscopic and Genetic Characterization of Bacterial Symbionts With Bioluminescent Potential in Pyrosoma atlanticum, Alexis Berger, Patricia L. Blackwelder, Tamara Frank, Tracey Sutton, Nina Pruzinsky, Natalie Slayden, Jose V. Lopez
Jose Lopez

Microbiome Analyses Demonstrate Specific Communities Within Five Shark Species, Rachael Storo, Cole Easson, Mahmood S. Shivji, Jose V. Lopez
Mahmood Shivji

ddPCR Reveals SARS-CoV-2 Variants in Florida Wastewater, Eben Gering, Jacob Colbert, Sarah Schmedes, George Duncan, Jose V. Lopez, Jessy Motes, James Weiss, Taj Azarian, Omer Tekin, Jason Blanton
Biology Faculty Articles

Microscopic and Genetic Characterization of Bacterial Symbionts With Bioluminescent Potential in Pyrosoma atlanticum, Alexis Berger, Patricia L. Blackwelder, Tamara Frank, Tracey Sutton, Nina Pruzinsky, Natalie Slayden, Jose V. Lopez
Patricia Blackwelder

Microscopic and Genetic Characterization of Bacterial Symbionts With Bioluminescent Potential in Pyrosoma atlanticum, Alexis Berger, Patricia L. Blackwelder, Tamara Frank, Tracey Sutton, Nina Pruzinsky, Natalie Slayden, Jose V. Lopez
Tamara Frank

Microscopic and Genetic Characterization of Bacterial Symbionts With Bioluminescent Potential in Pyrosoma atlanticum, Alexis Berger, Patricia L. Blackwelder, Tamara Frank, Tracey Sutton, Nina Pruzinsky, Natalie Slayden, Jose V. Lopez
Tracey Sutton

Microscopic and Genetic Characterization of Bacterial Symbionts With Bioluminescent Potential in Pyrosoma atlanticum, Alexis Berger, Patricia L. Blackwelder, Tamara Frank, Tracey Sutton, Nina Pruzinsky, Natalie Slayden, Jose V. Lopez
Biology Faculty Articles

Microbiome Analyses Demonstrate Specific Communities Within Five Shark Species, Rachael Storo, Cole Easson, Mahmood S. Shivji, Jose V. Lopez
Biology Faculty Articles

Complete genome sequence of microcystis aeruginosa FD4, isolated from a subtropical river in Southwest Florida, Hidetoshi Urakawa, Taylor L. Hancock, Jacob H. Steele, Elizabeth K. Dahedl, Haruka E. Urakawa, Luka K. Ndungu, Lauren E. Krausfeldt, Barry H. Rosen, Jose V. Lopez
Biology Faculty Articles

Microbial Community Shift Under Exposure of Dredged Sediments From a Eutrophic Bay, Juliana R. Nascimento, Cole Easson, Diogo de A. Jurelevicius, Jose V. Lopez, Edison D. Bidone, Elisamara Sabadini-Santos
Jose Lopez

Combined eDNA and Acoustic Analysis Reflects Diel Vertical Migration of Mixed Consortia in the Gulf of Mexico, Cole G. Easson, Kevin M. Boswell, Nicholas Tucker, Joseph D. Warren, Jose V. Lopez
Biology Faculty Articles

Microbial Community Shift Under Exposure of Dredged Sediments From a Eutrophic Bay, Juliana R. Nascimento, Cole Easson, Diogo de A. Jurelevicius, Jose V. Lopez, Edison D. Bidone, Elisamara Sabadini-Santos
Biology Faculty Articles

Metagenomic characterization of the cyanobacterial harmful algal blooms in Lake Okeechobee, Lauren E. Krausfeldt, Barry Rosen, Viviana Mazzei, Eric Fortman, Elizaveta Shmakova, Jose V. Lopez
HCAS Ocean Science Research Symposium

Metagenomic characterization of the cyanobacterial harmful algal blooms in Lake Okeechobee, Lauren E. Krausfeldt, Barry Rosen, Viviana Mazzei, Eric Fortman, Elizaveta Shmakova, Jose V. Lopez
Jose Lopez

An Example of Microbiology Crowdfunding: The Skin Deep MIcrobiome Project, Jose V. Lopez, Renee Potens, Jorie L. Skutas, Nidhi Vijayan, Kyle Roebuck
Jose Lopez

Investigating the Microbiota of Stormwater Treatment Areas, R. Harkas, Jose V. Lopez, Paul Baldauf, Aarti Raja
Jose Lopez

Investigating the Microbiota of Stormwater Treatment Areas, R. Harkas, Jose V. Lopez, Paul Baldauf, Aarti Raja
Aarti Raja

Multiple Facets of Marine Invertebrate Conservation Genomics, Jose V. Lopez, Bishoy Kamel, Monica Medina, Timothy Collins, Iliana B. Baums
Biology Faculty Articles

Investigating the Microbiota of Stormwater Treatment Areas, R. Harkas, Jose V. Lopez, Paul Baldauf, Aarti Raja
Paul Baldauf

Multiple Facets of Marine Invertebrate Conservation Genomics, Jose V. Lopez, Bishoy Kamel, Monica Medina, Timothy Collins, Iliana B. Baums
Jose Lopez

Cooperation and Competition Shape Ecological Resistance During Periodic Spatial Disturbance of Engineered Bacteria, Cortney E. Wilson, Allison J. Lopatkin, Travis J. A. Craddock, William W. Driscoll, Omar T. Eldakar, Jose V. Lopez, Robert P. Smith
Travis Craddock

Investigating the Microbiota of Stormwater Treatment Areas, R. Harkas, Jose V. Lopez, Paul Baldauf, Aarti Raja
Biology Faculty Proceedings, Presentations, Speeches, Lectures

Microbiomes and Dynamic Genomes of Anglerfish Bacterial Symbionts in the Gulf of Mexico, Jose V. Lopez, Lindsay Freed, Cole Easson, Dana Feder, Tracey Sutton, Dante Fenolio, Tory Hendry
Tracey Sutton

Is There a Link between Aging and Microbiome Diversity in Exceptional Mammalian Longevity?, Graham M. Hughes, John Leech, Sebastien J. Puechmaille, Jose V. Lopez, Emma C. Teeling
Jose Lopez

Microbiomes and Dynamic Genomes of Anglerfish Bacterial Symbionts in the Gulf of Mexico, Jose V. Lopez, Lindsay Freed, Cole Easson, Dana Feder, Tracey Sutton, Dante Fenolio, Tory Hendry
Jose Lopez

Is There a Link between Aging and Microbiome Diversity in Exceptional Mammalian Longevity?, Graham M. Hughes, John Leech, Sebastien J. Puechmaille, Jose V. Lopez, Emma C. Teeling
Biology Faculty Articles

Microbiomes and Dynamic Genomes of Anglerfish Bacterial Symbionts in the Gulf of Mexico, Jose V. Lopez, Lindsay Freed, Cole Easson, Dana Feder, Tracey Sutton, Dante Fenolio, Tory Hendry
HCAS Ocean Science Research Symposium

Asynchronous Reproduction and Multi-Spawning in the Coral-Excavating Sponge Cliona delitrix, Andia Chaves Fonnegra, Manuel Maldonado, Patricia Blackwelder, Jose V. Lopez
Patricia Blackwelder

A Molecular Systematic Survey of Cultured Microbial Associates of Deep-Water Marine Invertebrates, Karen S. Sfanos, Dedra K. Harmody, Phat Dang, Angela Ledger, Shirley A. Pomponi, Peter McCarthy, Jose V. Lopez
Jose Lopez

Asynchronous Reproduction and Multi-Spawning in the Coral-Excavating Sponge Cliona delitrix, Andia Chaves Fonnegra, Manuel Maldonado, Patricia Blackwelder, Jose V. Lopez
Jose Lopez

Genetic Variation of the Scleractinian Coral Stylophora pistillata, from Western Pacific Reefs, M. Takabayashi, D. Carter, Jose V. Lopez, O. Hoegh-Guldberg
Jose Lopez

Complete Nucleotide Sequences of the Domestic Cat (Felis catus) Mitochondrial Genome and a Transposed mtDNA Tandem Repeat (Numt) in the Nuclear Genome, Jose V. Lopez, Stanley Cevario, Stephen J. O'Brien
Jose Lopez

Genetic and Phylogenetic Evidence for Horizontal Gene Transfer Among Ecologically Disparate Groups of Marine Vibrio, Maria Hoffman, Steven R. Monday, Peter J. McCarthy, Jose V. Lopez, Markus Fischer, Eric W. Brown
Jose Lopez

HSV-2-induced Tumorigenicity in HPV 16-immortalized Human Genital Keratinocytes, Joseph A. Dipaolo, Craig D. Woodworth, Nicholas C. Popescu, Debra L. Koval, Jose V. Lopez, Jay Doniger
Jose Lopez

HBMMD: An Enhanced Database of the Microorganisms Associated with Deeper Water Marine Invertebrates, Aravinda S. Gunasekera, Karen S. Sfanos, Dedra K. Harmody, Shirley A. Pomponi, Peter J. McCarthy, Jose V. Lopez
Jose Lopez

Microbiome and bacterioplankton rRNA gene sequence data collected from Gulf of Mexico seawater samples, Cruises DP01 and DP02 from May 2015 - August 2015, Cole Easson, Jose V. Lopez
Jose Lopez

Complete bacterial symbiont genome sequences from anglerfish Cryptopsaras couesii and Melanocetus johnsonii, Lindsay L. Freed, Dana Fadera, Dante Fenolio, Tracey Sutton, Jose V. Lopez
Jose Lopez

Cooperation and Competition Shape Ecological Resistance During Periodic Spatial Disturbance of Engineered Bacteria, Cortney E. Wilson, Allison J. Lopatkin, Travis J. A. Craddock, William W. Driscoll, Omar T. Eldakar, Jose V. Lopez, Robert P. Smith
Jose Lopez

Molecular Phylogeny of Mitochondrial Cytochrome b and 12S rRNA Sequences in the Felidae: Ocelot and Domestic Cat Lineages, Ryuichi Masuda, Jose V. Lopez, Jill Pecon Slattery, Naoya Yuhki, Stephen James O'Brien
Jose Lopez

Molecular Determination of Species Boundaries in Corals: Genetic Analysis of the Montastraea annularis Complex Using Amplified Fragment Length Polymorphisms and a Microsatellite Marker, Jose V. Lopez, Ralf Kersanach, Stephen A. Rehner, Nancy Knowlton
Jose Lopez

Naturally Mosaic Operons for Secondary Metabolite Biosynthesis: Variability and Putative Horizontal Transfer of Discrete Catalytic Domains of the Epothilone Polyketide Synthase Locus, Jose V. Lopez
Jose Lopez

Localization of Polyketide Synthase Encoding Genes to the Toxic Dinoflagellate Karenia brevis, Richard V. Snyder, Maria A. Guerrero, Christopher D. Sinigalliano, Jamie Winshell, Roberto Perez, Jose V. Lopez, Kathleen S. Rein
Jose Lopez

Rates of Nuclear and Cytoplasmic Mitochondrial DNA Sequence Divergence in Mammals, Jose V. Lopez, Melanie Culver, J. Claiborne Stephens, Warren E. Johnson, Stephen James O'Brien
Jose Lopez

The Long and Short of Nuclear Mitochondrial DNA (Numt) Lineages, Jose V. Lopez, J. Claiborne Stephens, Stephen J. O'Brien
Jose Lopez

Population Dynamics of Vibrio spp. Associated with Marine Sponge Microcosms, Maria Hoffman, Markus Fischer, Andrea Ottesen, Peter J. McCarthy, Jose V. Lopez, Eric W. Brown, Steven R. Monday
Jose Lopez

Use of Real-Time qPCR to Quantify Members of the Unculturable Heterotrophic Bacterial Community in a Deep Sea Marine Sponge, Vetulina sp., M. Cassler, C. L. Peterson, A. Ledger, Shirley A. Pomponi, A. E. Wright, R. Winegar, P. J. McCarthy, Jose V. Lopez
Jose Lopez

Vibrio caribbeanicus sp. nov., Isolated from the Marine Sponge Scleritoderma cyanea, Maria Hoffman, Steven R. Monday, Marc W. Allard, Errol A. Strain, Paul Whittaker, Marianna Naum, Peter J. McCarthy, Jose V. Lopez, Markus Fischer, Eric W. Brown
Jose Lopez

Molecular Phylogeny of Mitochondrial Cytochrome b and 12S rRNA Sequences in the Felidae: Ocelot and Domestic Cat Lineages, Ryuichi Masuda, Jose V. Lopez, Jill Pecon Slattery, Naoya Yuhki, Stephen James O'Brien
Stephen O'Brien

Rates of Nuclear and Cytoplasmic Mitochondrial DNA Sequence Divergence in Mammals, Jose V. Lopez, Melanie Culver, J. Claiborne Stephens, Warren E. Johnson, Stephen James O'Brien
Stephen O'Brien

Cooperation and Competition Shape Ecological Resistance During Periodic Spatial Disturbance of Engineered Bacteria, Cortney E. Wilson, Allison J. Lopatkin, Travis J. A. Craddock, William W. Driscoll, Omar T. Eldakar, Jose V. Lopez, Robert P. Smith
Robert Smith

Complete bacterial symbiont genome sequences from anglerfish Cryptopsaras couesii and Melanocetus johnsonii, Lindsay L. Freed, Dana Fadera, Dante Fenolio, Tracey Sutton, Jose V. Lopez
Tracey Sutton

Complete mitogenome sequences of smooth hammerhead sharks, Sphyrna zygaena, from the eastern and western Atlantic, Derek S. Guy, Cassandra L. Ruck, Jose V. Lopez, Mahmood S. Shivji
Biology Faculty Articles

Complete bacterial symbiont genome sequences from anglerfish Cryptopsaras couesii and Melanocetus johnsonii, Lindsay L. Freed, Dana Fadera, Dante Fenolio, Tracey Sutton, Jose V. Lopez
DEEPEND Datasets

Cooperation and Competition Shape Ecological Resistance During Periodic Spatial Disturbance of Engineered Bacteria, Cortney E. Wilson, Allison J. Lopatkin, Travis J. A. Craddock, William W. Driscoll, Omar T. Eldakar, Jose V. Lopez, Robert P. Smith
Omar Eldakar

The Human Microbiome: An Emerging Tool in Forensics, Jarrad T. Hampton-Marcell, Jose V. Lopez, Jack A. Gilbert
Jose Lopez

The Human Microbiome: An Emerging Tool in Forensics, Jarrad T. Hampton-Marcell, Jose V. Lopez, Jack A. Gilbert
Biology Faculty Articles

Cooperation and Competition Shape Ecological Resistance During Periodic Spatial Disturbance of Engineered Bacteria, Cortney E. Wilson, Allison J. Lopatkin, Travis J. A. Craddock, William W. Driscoll, Omar T. Eldakar, Jose V. Lopez, Robert P. Smith
Biology Faculty Articles

Microbiome and bacterioplankton rRNA gene sequence data collected from Gulf of Mexico seawater samples, Cruises DP01 and DP02 from May 2015 - August 2015, Cole Easson, Jose V. Lopez
DEEPEND Datasets

Asynchronous Reproduction and Multi-Spawning in the Coral-Excavating Sponge Cliona delitrix, Andia Chaves Fonnegra, Manuel Maldonado, Patricia Blackwelder, Jose V. Lopez
Biology Faculty Proceedings, Presentations, Speeches, Lectures

An Example of Microbiology Crowdfunding: The Skin Deep MIcrobiome Project, Jose V. Lopez, Renee Potens, Jorie L. Skutas, Nidhi Vijayan, Kyle Roebuck
Biology Faculty Proceedings, Presentations, Speeches, Lectures

Genetic and Phylogenetic Evidence for Horizontal Gene Transfer Among Ecologically Disparate Groups of Marine Vibrio, Maria Hoffman, Steven R. Monday, Peter J. McCarthy, Jose V. Lopez, Markus Fischer, Eric W. Brown
Biology Faculty Articles

Vibrio caribbeanicus sp. nov., Isolated from the Marine Sponge Scleritoderma cyanea, Maria Hoffman, Steven R. Monday, Marc W. Allard, Errol A. Strain, Paul Whittaker, Marianna Naum, Peter J. McCarthy, Jose V. Lopez, Markus Fischer, Eric W. Brown
Biology Faculty Articles

Population Dynamics of Vibrio spp. Associated with Marine Sponge Microcosms, Maria Hoffman, Markus Fischer, Andrea Ottesen, Peter J. McCarthy, Jose V. Lopez, Eric W. Brown, Steven R. Monday
Biology Faculty Articles

Use of Real-Time qPCR to Quantify Members of the Unculturable Heterotrophic Bacterial Community in a Deep Sea Marine Sponge, Vetulina sp., M. Cassler, C. L. Peterson, A. Ledger, Shirley A. Pomponi, A. E. Wright, R. Winegar, P. J. McCarthy, Jose V. Lopez
Biology Faculty Articles

Localization of Polyketide Synthase Encoding Genes to the Toxic Dinoflagellate Karenia brevis, Richard V. Snyder, Maria A. Guerrero, Christopher D. Sinigalliano, Jamie Winshell, Roberto Perez, Jose V. Lopez, Kathleen S. Rein
Biology Faculty Articles

A Molecular Systematic Survey of Cultured Microbial Associates of Deep-Water Marine Invertebrates, Karen S. Sfanos, Dedra K. Harmody, Phat Dang, Angela Ledger, Shirley A. Pomponi, Peter McCarthy, Jose V. Lopez
Biology Faculty Articles

HBMMD: An Enhanced Database of the Microorganisms Associated with Deeper Water Marine Invertebrates, Aravinda S. Gunasekera, Karen S. Sfanos, Dedra K. Harmody, Shirley A. Pomponi, Peter J. McCarthy, Jose V. Lopez
Biology Faculty Articles

Naturally Mosaic Operons for Secondary Metabolite Biosynthesis: Variability and Putative Horizontal Transfer of Discrete Catalytic Domains of the Epothilone Polyketide Synthase Locus, Jose V. Lopez
Biology Faculty Articles

Genetic Variation of the Scleractinian Coral Stylophora pistillata, from Western Pacific Reefs, M. Takabayashi, D. Carter, Jose V. Lopez, O. Hoegh-Guldberg
Biology Faculty Articles

Molecular Determination of Species Boundaries in Corals: Genetic Analysis of the Montastraea annularis Complex Using Amplified Fragment Length Polymorphisms and a Microsatellite Marker, Jose V. Lopez, Ralf Kersanach, Stephen A. Rehner, Nancy Knowlton
Biology Faculty Articles

The Long and Short of Nuclear Mitochondrial DNA (Numt) Lineages, Jose V. Lopez, J. Claiborne Stephens, Stephen J. O'Brien
Biology Faculty Articles

Rates of Nuclear and Cytoplasmic Mitochondrial DNA Sequence Divergence in Mammals, Jose V. Lopez, Melanie Culver, J. Claiborne Stephens, Warren E. Johnson, Stephen James O'Brien
Biology Faculty Articles

Molecular Phylogeny of Mitochondrial Cytochrome b and 12S rRNA Sequences in the Felidae: Ocelot and Domestic Cat Lineages, Ryuichi Masuda, Jose V. Lopez, Jill Pecon Slattery, Naoya Yuhki, Stephen James O'Brien
Biology Faculty Articles

Complete Nucleotide Sequences of the Domestic Cat (Felis catus) Mitochondrial Genome and a Transposed mtDNA Tandem Repeat (Numt) in the Nuclear Genome, Jose V. Lopez, Stanley Cevario, Stephen J. O'Brien
Biology Faculty Articles

HSV-2-induced Tumorigenicity in HPV 16-immortalized Human Genital Keratinocytes, Joseph A. Dipaolo, Craig D. Woodworth, Nicholas C. Popescu, Debra L. Koval, Jose V. Lopez, Jay Doniger
Biology Faculty Articles