Effect of a Single Amino Acid Change in MHC Class I Molecules on the Rate of Progression to AIDS, Xiaojiang Gao, George W. Nelson, Peter Karacki, Maureen P. Martin, John Phair, Richard A. Kaslow, James J. Goedert, Susan Buchbinder, Keith Hoots, David Vlahov, Stephen J. O'Brien, Mary Carrington
Stephen O'Brien

Genetic Variants in Nuclear-Encoded Mitochondrial Genes Influence AIDS Progression, Sher L. Hendrickson, J. A. Lautenberger, Leslie Wei Chinn, Michael Malasky, Lawrence Kingsley, James J. Goedert, Gregory D. Kirk, Edward Gomperts, Susan Buchbinder, Jennifer L. Troyer, Stephen J. O'Brien
Stephen O'Brien

KIR/HLA Pleiotropism: Protection against Both HIV and Opportunistic Infections, Ying Qi, Maureen P. Martin, Xiaojiang Gao, Lisa Jacobson, James J. Goedert, Susan Buchbinder, Gregory D. Kirk, Stephen J. O'Brien, John Trowsdale, Mary Carrington
Stephen O'Brien

Polymorphisms of CUL5 are Associated with CD4+ T Cell Loss in HIV-1 Infected Individuals, Ping An, Priya Duggal, Li Hua Wang, Stephen J. O'Brien, Sharyne Donfield, James J. Goedert, John Phair, Susan Buchbinder, Gregory D. Kirk, Cheryl Winkler
Stephen O'Brien

Regulatory Polymorphisms in the Cyclophilin A Gene, PPIA, Accelerate Progression to AIDS, Ping An, Li Hua Wang, Holli Hutcheson-Dilks, George Nelson, Sharyne Donfield, James J. Goedert, Charles Rinaldo, Susan Buchbinder, Gregory D. Kirk, Stephen J. O'Brien, Cheryl Winkler
Stephen O'Brien

Role of Exonic Variation in Chemokine Receptor Genes on AIDS: CCRL2 F167Y Association with Pneumocystis Pneumonia, Ping An, Rongling Li, Ji Ming Wang, Teizo Yoshimura, Munehisa Takahashi, Ram Samudralal, Stephen J. O'Brien, John Phair, James J. Goedert, Gregory D. Kirk, Jennifer L. Troyer, Efe Sezgin, Susan Buchbinder, Sharyne Donfield, George W. Nelson, Cheryl Winkler
Stephen O'Brien

Association Study of Common Genetic Variants and HIV- 1 Acquisition in 6,300 Infected Cases and 7,200 Controls, Paul J. McLaren, Cedric Coulonges, Stephan Ripke, Leonard H. van den Berg, Susan Buchbinder, Mary Carrington, Andrea Cossarizza, Judith Dalmau, Steven G. Deeks, Olivier Delaneau, Andrea De Luca, James J. Goedert, David W. Haas, Joshua T. Herbeck, Sekar Kathiresan, Gregory D. Kirk, Olivier Lambotte, Ma Luo, Simon Mallal, Danielle van Manen, Javier Martinez-Picado, Florencia Pereyra, Francis A. Plummer, Guido Poli, Ying Qi, Pierre Rucart, Manj S. Sandhu, Patrick R. Shea, Hanneke Schuitemaker, Ioannis Theodorou, Fredrik Vannberg, Jan Veldink, Bruce D. Walker, Amy C. Weintrob, Cheryl Winkler, Steven M. Wolinsky, Amalio Telenti, David B. Goldstein, Paul I. W. de Bakker, Jean-Francois Zagury, Jacques Fellay
Biology Faculty Articles

Role of Exonic Variation in Chemokine Receptor Genes on AIDS: CCRL2 F167Y Association with Pneumocystis Pneumonia, Ping An, Rongling Li, Ji Ming Wang, Teizo Yoshimura, Munehisa Takahashi, Ram Samudralal, Stephen J. O'Brien, John Phair, James J. Goedert, Gregory D. Kirk, Jennifer L. Troyer, Efe Sezgin, Susan Buchbinder, Sharyne Donfield, George W. Nelson, Cheryl Winkler
Biology Faculty Articles

Genome-Wide Association Study Implicates PARD3B-Based AIDS Restriction, Jennifer L. Troyer, George W. Nelson, J. A. Lautenberger, Leslie Chinn, Carl McIntosh, Randall C. Johnson, Efe Sezgin, Bailey Kessing, Michael Malasky, Sher L. Hendrickson, Guan Li, J. U. Pontius, M. Tang, Ping An, Cheryl Winkler, Sophie Limou, Sigrid le Clerc, Olivier Delaneau, Jean-Francois Zagury, Hanneke Schuitemaker, Danielle van Manen, Jay H. Bream, Edward Gomperts, Susan Buchbinder, James J. Goedert, Gregory Kirk, Stephen J. O'Brien
Biology Faculty Articles

Genetic Associations of Variants in Genes Encoding HIV-Dependency Factors Required for HIV-1 Infection, Leslie Chinn, M. Tang, Bailey Kessing, J. A. Lautenberger, Jennifer L. Troyer, Michael Malasky, Carl McIntosh, Gregory D. Kirk, Steven M. Wolinsky, Susan Buchbinder, Edward Gomperts, James J. Goedert, Stephen J. O'Brien
Biology Faculty Articles

Examination of Disease-Based Selection, Demographic History and Population Structure in European Y-Chromosome Haplogroup I, Efe Sezgin, Alyssa Drosdak, Carl McIntosh, Bailey Kessing, J. A. Lautenberger, James J. Goedert, John Phair, Jennifer L. Troyer, Michael W. Smith, Stephen J. O'Brien
Biology Faculty Articles

Genetic Variants in Nuclear-Encoded Mitochondrial Genes Influence AIDS Progression, Sher L. Hendrickson, J. A. Lautenberger, Leslie Wei Chinn, Michael Malasky, Lawrence Kingsley, James J. Goedert, Gregory D. Kirk, Edward Gomperts, Susan Buchbinder, Jennifer L. Troyer, Stephen J. O'Brien
Biology Faculty Articles

Multistage Genomewide Association Study Identifies a Locus at 1q41 Associated with Rate of HIV-1 Disease Progression to Clinical AIDS, Joshua T. Herbeck, Geoffrey S. Gottlieb, Cheryl Winkler, George W. Nelson, Ping An, Brandon S. Maust, Kim G. Wong, Jennifer L. Troyer, James J. Goedert, Bailey Kessing, Roger Detels, Steven M. Wolinsky, Jeremy J. Martinson, Susan Buchbinder, Gregory D. Kirk, Lisa Jacobson, Joseph Margolick, Richard A. Kaslow, Stephen J. O'Brien, James I. Mullins
Biology Faculty Articles

Extended IL10 Haplotypes and their Association with HIV Progression to AIDS, T. K. Oleksyk, Sadeep Shrestha, Ann L. Truelove, James J. Goedert, Sharyne Donfield, John Phair, Shruti Mehta, Stephen J. O'Brien, M. W. Smith
Biology Faculty Articles

Association of Y Chromosome Haplogroup I with HIV Progression, and HAART Outcome, Efe Sezgin, Joanne M. Lind, Sadeep Shrestha, Sher L. Hendrickson, James J. Goedert, Sharyne Donfield, Gregory D. Kirk, John Phair, Jennifer L. Troyer, Stephen J. O'Brien, Michael W. Smith
Biology Faculty Articles

Mitochondrial DNA Haplogroups Influence AIDS Progression, Sher L. Hendrickson, Holli Hutcheson, Eduardo Ruiz-Pesini, Jason C. Poole, J. A. Lautenberger, Efe Sezgin, Lawrence Kingsley, James J. Goedert, David Vlahov, Sharyne Donfield, Douglas C. Wallace, Stephen J. O'Brien
Biology Faculty Articles

Host Genetic Influences on Highly Active Antiretroviral Therapy Efficacy and AIDS-Free Survival, Sher L. Hendrickson, Lisa Jacobson, George W. Nelson, John Phair, J. A. Lautenberger, Randall C. Johnson, Lawrence Kingsley, Joseph Margolick, Roger Detels, James J. Goedert, Stephen J. O'Brien
Biology Faculty Articles

Evaluation of IL10, IL19 and IL20 Gene Polymorphisms and Chronic Hepatitis B Infection Outcome, Ann L. Truelove, T. K. Oleksyk, Sadeep Shrestha, Chloe L. Thio, James J. Goedert, Sharyne Donfield, Gregory D. Kirk, David L. Thomas, Stephen J. O'Brien, Michael W. Smith
Biology Faculty Articles

Regulatory Polymorphisms in the Cyclophilin A Gene, PPIA, Accelerate Progression to AIDS, Ping An, Li Hua Wang, Holli Hutcheson-Dilks, George Nelson, Sharyne Donfield, James J. Goedert, Charles Rinaldo, Susan Buchbinder, Gregory D. Kirk, Stephen J. O'Brien, Cheryl Winkler
Biology Faculty Articles

Innate Partnership of HLA-B and KIR3DL1 Subtypes Against HIV-1, Maureen P. Martin, Ying Qi, Xiaojiang Gao, Eriko Yamada, Jeffrey N. Martin, Florencia Fereyra, Sara Colombo, Elizabeth E. Brown, W. Lesley Shupert, John Phair, James J. Goedert, Susan Buchbinder, Gregory D. Kirk, Amalio Telenti, Mark Connors, Stephen J. O'Brien, Bruce D. Walker, Peter Parham, Steven G. Deeks, Daniel W. McVicar, Mary Carrington
Biology Faculty Articles

Polymorphisms of CUL5 are Associated with CD4+ T Cell Loss in HIV-1 Infected Individuals, Ping An, Priya Duggal, Li Hua Wang, Stephen J. O'Brien, Sharyne Donfield, James J. Goedert, John Phair, Susan Buchbinder, Gregory D. Kirk, Cheryl Winkler
Biology Faculty Articles

KIR/HLA Pleiotropism: Protection against Both HIV and Opportunistic Infections, Ying Qi, Maureen P. Martin, Xiaojiang Gao, Lisa Jacobson, James J. Goedert, Susan Buchbinder, Gregory D. Kirk, Stephen J. O'Brien, John Trowsdale, Mary Carrington
Biology Faculty Articles

Genetic Variation in the CCL18-CCL3-CCL4 Chemokine Gene Cluster Influences HIV Type 1 Transmission and AIDS Disease Progression, William Modi, J. A. Lautenberger, Ping An, Kevin Scott, James J. Goedert, Gregory D. Kirk, Susan Buchbinder, John Phair, Sharyne Donfield, Stephen J. O'Brien, Cheryl Winkler
Biology Faculty Articles

Haplotype Analysis of the SDF-1 (CXCL12) Gene in a Longitudinal HIV-1/AIDS Cohort Study, William Modi, K. Scott, James J. Goedert, David Vlahov, Susan Buchbinder, Roger Detels, Sharyne Donfield, Stephen J. O'Brien, Cheryl Winkler
Biology Faculty Articles

AIDS Restriction HLA Allotypes Target Distinct Intervals of HIV-1 Pathogenesis, Xiaojiang Gao, Arman A. Bashirova, Astrid K. N. Iversen, John Phair, James J. Goedert, Susan Buchbinder, Keith Hoots, David Vlahov, Marcus Altfeld, Stephen J. O'Brien, Mary Carrington
Biology Faculty Articles

Single Nucleotide Polymorphisms and Haplotypes in the IL10 Region Associated with HCV Clearance, T. K. Oleksyk, Chloe L. Thio, Ann L. Truelove, James J. Goedert, Sharyne Donfield, Gregory D. Kirk, D. L. Thomas, Stephen J. O'Brien, M. W. Smith
Biology Faculty Articles

HLA and NK Cell Inhibitory Receptor Genes in Resolving Hepatitis C Virus Infection, Salim I. Khakoo, Chloe L. Thio, Maureen P. Martin, Collin R. Brooks, Xiaojiang Gao, Jacquie Astemborski, Jie Cheng, James J. Goedert, David Vlahov, Margaret Hilgartner, Steven Cox, Ann-Margeret Little, Graeme J. Alexander, Matthew E. Cramp, Stephen J. O'Brien, William M. C. Rosenberg, David L. Thomas, Mary Carrington
Biology Faculty Articles

MICA and Recovery from Hepatitis C Virus and Hepatitis B Virus Infections, Peter Karacki, Xiaojiang Gao, Chloe L. Thio, D. L. Thomas, James J. Goedert, David Vlahov, Richard A. Kaslow, Steffanie A. Strathdee, Margaret Hilgartner, Stephen J. O'Brien, Mary Carrington
Biology Faculty Articles

An Analysis of Tumor Necrosis Factor α Gene Polymorphisms and Haplotypes with Natural Clearance of Hepatitis C Virus Infection, Chloe L. Thio, James J. Goedert, Timothy L. Mosbruger, David Vlahov, Steffanie A. Strathdee, Stephen J. O'Brien, Jacquie Astemborski, D. L. Thomas
Biology Faculty Articles

MCP-1-MCP-3–Eotaxin Gene Cluster Influences HIV-1 Transmission, William Modi, James J. Goedert, Steffanie A. Strathdee, Susan Buchbinder, Roger Detels, Sharyne Donfield, Stephen J. O'Brien, Cheryl Winkler
Biology Faculty Articles

Epistatic Interaction Between KIR3DS1 and HLA-B Delays the Progression to AIDS, Maureen P. Martin, Xiaojiang Gao, Jeong-Hee Lee, George W. Nelson, Roger Detels, James J. Goedert, Susan Buchbinder, Keith Hoots, David Vlahov, John Trowsdale, Michael Wilson, Stephen J. O'Brien, Mary Carrington
Biology Faculty Articles

Racial Differences in HLA Class II Associations with Hepatitis C Virus Outcomes, Chloe L. Thio, David L. Thomas, James J. Goedert, David Vlahov, Kenrad E. Nelson, Margaret Hilgartner, Stephen J. O'Brien, Peter Karacki, Darlene Marti, Jacquie Astemborski, Mary Carrington
Biology Faculty Articles

Effect of a Single Amino Acid Change in MHC Class I Molecules on the Rate of Progression to AIDS, Xiaojiang Gao, George W. Nelson, Peter Karacki, Maureen P. Martin, John Phair, Richard A. Kaslow, James J. Goedert, Susan Buchbinder, Keith Hoots, David Vlahov, Stephen J. O'Brien, Mary Carrington
Biology Faculty Articles

Reduced Risk of AIDS Lymphoma in Individuals Heterozygous for the CCR5-Δ32 Mutation, Michael Dean, Lisa Jacobson, Glen McFarlane, Joseph Margolick, Frank J. Jenkins, O. M. Zack Howard, Hui-Fang Dong, James J. Goedert, Susan Buchbinder, Edward Gomperts, David Vlahov, Joost J. Oppenheim, Stephen J. O'Brien, Mary Carrington
Biology Faculty Articles

HLA and HIV-1: Heterozygote Advantage and B*35-Cw*04 Disadvantage, Mary Carrington, George W. Nelson, Maureen P. Martin, Teri Kissner, David Vlahov, James J. Goedert, Richard A. Kaslow, Susan Buchbinder, Keith Hoots, Stephen J. O'Brien
Biology Faculty Articles

Genetic Acceleration of AIDS Progression by a Promoter Variant of CCR5, Maureen P. Martin, Michael Dean, Michael W. Smith, Cheryl Winkler, Bernard Gerrard, Nelson L. Michael, Benhur Lee, Robert W. Doms, Joseph Margolick, Susan Buchbinder, James J. Goedert, Thomas R. O'Brien, Margaret Hilgartner, David Vlahov, Stephen J. O'Brien, Mary Carrington
Biology Faculty Articles

Contrasting Genetic Influence of CCR2 and CCR5 Variants on HIV-1 Infection and Disease Progression, Michael W. Smith, Michael Dean, Mary Carrington, Cheryl Winkler, Gavin A. Huttley, Deborah A. Lomb, James J. Goedert, Thomas R. O'Brien, Lisa Jacobson, Richard A. Kaslow, Susan Buchbinder, Eric Vittinghoff, David Vlahov, Keith Hoots, Margaret Hilgartner, Hemophilia Growth and Development Study, Multicenter AIDS Cohort Study, Multicenter Hemophilia Cohort Study, San Francisco City Cohort, ALIVE Study, Stephen J. O'Brien
Biology Faculty Articles

Participants in HIV Study: Correction, Michael Dean, Mary Carrington, James J. Goedert, Stephen J. O'Brien
Biology Faculty Articles

HIV Causes AIDS: Koch's Postulates Fulfilled, Stephen J. O'Brien, James J. Goedert
Biology Faculty Articles

Genetic Restriction of HIV-1 Infection and Progression to AIDS by a Deletion Allele of the CKR5 Structural Gene, Michael Dean, Mary Carrington, Cheryl Winkler, Gavin A. Huttley, Michael W. Smith, Rando Allikmets, James J. Goedert, Susan Buchbinder, Eric Vittinghoff, Edward Gomperts, Sharyne Donfield, David Vlahov, Richard A. Kaslow, A. J. Saah, Charles Rinaldo, Roger Detels, Hemophilia Growth and Development Study, Multicenter AIDS Cohort Study, Multicenter Hemophilia Cohort Study, San Francisco City Cohort, Stephen J. O'Brien
Biology Faculty Articles