A decade of GigaScience: A perspective on conservation genetics, Stephen James O'Brien
Biology Faculty Articles

Atlas of Mammalian Chromosomes, Stephen James O'Brien, Alexander S. Graphodatsky, Polina L. Perelman
Stephen O'Brien

Atlas of Mammalian Chromosomes, Stephen James O'Brien, Joan C. Menninger, William G. Nash
Stephen O'Brien

Genetic Maps: Locus Maps of Complex Genomes, Stephen James O'Brien
Stephen O'Brien

Tears of the Cheetah: The Genetic Secrets of Our Animal Ancestors, Stephen James O'Brien
Stephen O'Brien

African and Asian leopards are highly differentiated at the genomic level, Johanna L.A. Paijmans, Axel Barlow, Matthew S. Becker, James A. Cahill, Joerns Fickel, Daniel W.G. Förster, Katrin Gries, Stefanie Hartmann, Rasmus Worsøe Havmøller, Kirstin Henneberger, Christian Kern, Andrew C. Kitchener, Eline D. Lorenzen, Frieder Mayer, Stephen James O'Brien, Johanna von Seth, Mikkel-Holder S. Sinding, Göran Spong, Olga Uphyrkina, Bettina Wachter, Michael V. Westbury, Love Dalén, Jong Bhak, Andrea Manica, Michael Hofreiter
Stephen O'Brien

African and Asian leopards are highly differentiated at the genomic level, Johanna L.A. Paijmans, Axel Barlow, Matthew S. Becker, James A. Cahill, Joerns Fickel, Daniel W.G. Förster, Katrin Gries, Stefanie Hartmann, Rasmus Worsøe Havmøller, Kirstin Henneberger, Christian Kern, Andrew C. Kitchener, Eline D. Lorenzen, Frieder Mayer, Stephen James O'Brien, Johanna von Seth, Mikkel-Holder S. Sinding, Göran Spong, Olga Uphyrkina, Bettina Wachter, Michael V. Westbury, Love Dalén, Jong Bhak, Andrea Manica, Michael Hofreiter
Biology Faculty Articles

Genome-wide Association Study Identifies New Loci Associated With Risk Of HBV Infection And Disease Progression, Zheng Zeng, Liu Hankui, Xu Huifang, Lu Haiying, Yu Yanyan, Xu Xiaoyuan, Yu Min, Zhang Tao, Tian Xiulan, Xi Hongli, Guan Liping, Zhang Jianguo, Stephen James O'Brien
Stephen O'Brien

Ultracontinuous single haplotype genome assemblies for the domestic cat (Felis catus) and Asian leopard cat (Prionailurus bengalensis), Kevin R. Bredemeyer, Andrew J. Harris, Gang Li, Le Zhao, Nicole M. Foley, Melody E. Roelke-Parker, Stephen James O'Brien, Leslie A. Lyons, Wesley C. Warren, William J. Murphy
Stephen O'Brien

Karyotype Evolution in 10 Pinniped Species: Variability of Heterochromatin versus High Conservatism of Euchromatin as Revealed by Comparative Molecular Cytogenetics, Violetta R. Beklemisheva, Polina L. Perelman, Natalya A. Lemskaya, Anastasiya A. Proskuryakova, Natalya A. Serdyukova, Vladimir N. Burkanov, Maksim B. Gorshunov, Oliver A. Ryder, Mary Thompson, Gina Lento, Stephen James O'Brien, Alexander S. Graphodatsky
Stephen O'Brien

Genome-wide Association Study Identifies New Loci Associated With Risk Of HBV Infection And Disease Progression, Zheng Zeng, Liu Hankui, Xu Huifang, Lu Haiying, Yu Yanyan, Xu Xiaoyuan, Yu Min, Zhang Tao, Tian Xiulan, Xi Hongli, Guan Liping, Zhang Jianguo, Stephen James O'Brien
Biology Faculty Articles

Karyotype Evolution in 10 Pinniped Species: Variability of Heterochromatin versus High Conservatism of Euchromatin as Revealed by Comparative Molecular Cytogenetics, Violetta R. Beklemisheva, Polina L. Perelman, Natalya A. Lemskaya, Anastasiya A. Proskuryakova, Natalya A. Serdyukova, Vladimir N. Burkanov, Maksim B. Gorshunov, Oliver A. Ryder, Mary Thompson, Gina Lento, Stephen James O'Brien, Alexander S. Graphodatsky
Biology Faculty Articles

Ultracontinuous single haplotype genome assemblies for the domestic cat (Felis catus) and Asian leopard cat (Prionailurus bengalensis), Kevin R. Bredemeyer, Andrew J. Harris, Gang Li, Le Zhao, Nicole M. Foley, Melody E. Roelke-Parker, Stephen James O'Brien, Leslie A. Lyons, Wesley C. Warren, William J. Murphy
Biology Faculty Articles

Atlas of Mammalian Chromosomes, Stephen James O'Brien, Alexander S. Graphodatsky, Polina L. Perelman
Biology Faculty Books and Book Chapters

Precision nomenclature for the new genomics, Harris A. Lewin, Jennifer A. Marshall Graves, Oliver A. Ryder, Alexander S. Graphodatsky, Stephen James O'Brien
Stephen O'Brien

Coral Crisis: Issues & Response Section 3, Richard E. Dodge, Stephen James O'Brien
Stephen O'Brien

Coral Crisis: Issues & Response Section 3, Richard E. Dodge, Stephen James O'Brien
Richard Dodge

Coral Crisis: Issues & Response Section 3, Richard E. Dodge, Stephen James O'Brien
Corals in Crisis 2019

Precision nomenclature for the new genomics, Harris A. Lewin, Jennifer A. Marshall Graves, Oliver A. Ryder, Alexander S. Graphodatsky, Stephen James O'Brien
Biology Faculty Articles

White Shark Genome Reveals Ancient Elasmobranch Adaptations Associated with Wound Healing and the Maintenance of Genome Stability, Nicholas J. Marra, Michael J. Stanhope, Nathaniel K. Jue, Minghui Wang, Qi Sun, Paulina D. Pavinski Bitar, Vincent P. Richards, Aleksey S. Komissarov, Mike Rayko, Sergey Kliver, Bryce J. Stanhope, Chuck Winkler, Stephen James O'Brien, Agostinho Antunes, Salvador Jorgensen, Mahmood S. Shivji
Stephen O'Brien

White Shark Genome Reveals Ancient Elasmobranch Adaptations Associated with Wound Healing and the Maintenance of Genome Stability, Nicholas J. Marra, Michael J. Stanhope, Nathaniel K. Jue, Minghui Wang, Qi Sun, Paulina D. Pavinski Bitar, Vincent P. Richards, Aleksey S. Komissarov, Mike Rayko, Sergey Kliver, Bryce J. Stanhope, Chuck Winkler, Stephen James O'Brien, Agostinho Antunes, Salvador Jorgensen, Mahmood S. Shivji
Mahmood Shivji

White Shark Genome Reveals Ancient Elasmobranch Adaptations Associated with Wound Healing and the Maintenance of Genome Stability, Nicholas J. Marra, Michael J. Stanhope, Nathaniel K. Jue, Minghui Wang, Qi Sun, Paulina D. Pavinski Bitar, Vincent P. Richards, Aleksey S. Komissarov, Mike Rayko, Sergey Kliver, Bryce J. Stanhope, Chuck Winkler, Stephen James O'Brien, Agostinho Antunes, Salvador Jorgensen, Mahmood S. Shivji
Biology Faculty Articles

X Chromosome Evolution in Cetartiodactyla, Anastasiya A. Proskuryakova, Anastasia I. Kulemzina, Polina L. Perelman, Alexey I. Makunin, Natalya A. Lemskaya, Violetta R. Beklemisheva, Denis M. Larkin, Marta Farre, Anna V. Kukekova, Oliver A. Ryder, Stephen James O'Brien, Alexander S. Graphodatsky
Stephen O'Brien

Pinniped Karyotype Evolution Substantiated by Comparative Chromosome Painting of 10 Pinniped Species (Pinnipedia, Carnivora), Violetta R. Beklemisheva, Polina L. Perelman, Natalya A. Lemskaya, Anastasia I. Kulemzina, Anastasiya A. Proskuryakova, Vladimir N. Burkanov, Stephen James O'Brien, Alexander S. Graphodatsky
Stephen O'Brien

A Moving Landscape for Comparative Genomics in Mammals, Stephen James O'Brien, Gaik Tamazian, Aleksey Komissarov, Pavel Dobrynin, Ksenia Krasheninnikova, Sergey Kliver, Nikolay Cherkasov, Klaus-Peter Koepfli
Stephen O'Brien

Analytical “Bake-Off” of Whole Genome Sequencing Quality for the Genome Russia Project Using a Small Cohort for Autoimmune Hepatitis, Daria V. Zhernakova, Sergei Kliver, Nikolay Cherkasov, Gaik Tamazian, Mikhail Rotkevich, Ksenia Krasheninnikova, Igor Evsyukov, Sviatoslav Sidorov, Pavel Dobrynin, Andrey A. Yurchenko, Valentin Shimansky, Irina V. Shcherbakova, Andrey S. Glotov, David L. Valle, Minzhong Tang, Emilia Shin, Kathleen B. Schwarz, Stephen James O'Brien
Stephen O'Brien

Genome-Wide Evolutionary Analysis of Natural History and Adaptation in the World’s Tigers, Yue-Chen Liu, Xin Sun, Carlos Driscoll, Dale G. Miquelle, Xiao Xu, Paolo Martelli, Olga Uphyrkina, James L. D. Smith, Stephen James O'Brien, Shu-Jin Luo
Biology Faculty Articles

Analytical “Bake-Off” of Whole Genome Sequencing Quality for the Genome Russia Project Using a Small Cohort for Autoimmune Hepatitis, Daria V. Zhernakova, Sergei Kliver, Nikolay Cherkasov, Gaik Tamazian, Mikhail Rotkevich, Ksenia Krasheninnikova, Igor Evsyukov, Sviatoslav Sidorov, Pavel Dobrynin, Andrey A. Yurchenko, Valentin Shimansky, Irina V. Shcherbakova, Andrey S. Glotov, David L. Valle, Minzhong Tang, Emilia Shin, Kathleen B. Schwarz, Stephen James O'Brien
Biology Faculty Articles

Impeding the rhinoceros surge of slaughter in southern Africa with DNA genetic forensic matching, Stephen James O'Brien, Cindy K. Harper, Anette Ludwig, Amy Clarke, Kagiso Makgopela, Andrey A. Yurchenko, Alan Guthrie, Pavel Dobrynin, Gaik Tamazian, Richard Emsli, Marile van Heerden, Markus Hofmeyr, Roderick Potter, Johannes Roets, Piet Beytell, Moses Otiende, Linus Kariuki, Raoul du Toit, Natasha Anderson, Joseph Okori, Alexey Antonik, Klaus-Peter Koepfli, Peter Thompson
Stephen O'Brien

X Chromosome Evolution in Cetartiodactyla, Anastasiya A. Proskuryakova, Anastasia I. Kulemzina, Polina L. Perelman, Alexey I. Makunin, Natalya A. Lemskaya, Violetta R. Beklemisheva, Denis M. Larkin, Marta Farre, Anna V. Kukekova, Oliver A. Ryder, Stephen James O'Brien, Alexander S. Graphodatsky
Biology Faculty Proceedings, Presentations, Speeches, Lectures

Pinniped Karyotype Evolution Substantiated by Comparative Chromosome Painting of 10 Pinniped Species (Pinnipedia, Carnivora), Violetta R. Beklemisheva, Polina L. Perelman, Natalya A. Lemskaya, Anastasia I. Kulemzina, Anastasiya A. Proskuryakova, Vladimir N. Burkanov, Stephen James O'Brien, Alexander S. Graphodatsky
Biology Faculty Proceedings, Presentations, Speeches, Lectures

A Moving Landscape for Comparative Genomics in Mammals, Stephen James O'Brien, Gaik Tamazian, Aleksey Komissarov, Pavel Dobrynin, Ksenia Krasheninnikova, Sergey Kliver, Nikolay Cherkasov, Klaus-Peter Koepfli
Biology Faculty Proceedings, Presentations, Speeches, Lectures

Impeding the rhinoceros surge of slaughter in southern Africa with DNA genetic forensic matching, Stephen James O'Brien, Cindy K. Harper, Anette Ludwig, Amy Clarke, Kagiso Makgopela, Andrey A. Yurchenko, Alan Guthrie, Pavel Dobrynin, Gaik Tamazian, Richard Emsli, Marile van Heerden, Markus Hofmeyr, Roderick Potter, Johannes Roets, Piet Beytell, Moses Otiende, Linus Kariuki, Raoul du Toit, Natasha Anderson, Joseph Okori, Alexey Antonik, Klaus-Peter Koepfli, Peter Thompson
HCAS Ocean Science Research Symposium

Molecular Phylogeny of Mitochondrial Cytochrome b and 12S rRNA Sequences in the Felidae: Ocelot and Domestic Cat Lineages, Ryuichi Masuda, Jose V. Lopez, Jill Pecon Slattery, Naoya Yuhki, Stephen James O'Brien
Jose Lopez

Rapid Evolution of a Heteroplasmic Repetitive Sequence in the Mitochondrial DNA Control Region of Carnivores, A Rus Hoelzel, Jose V. Lopez, Gabriel A. Dover, Stephen James O'Brien
Jose Lopez

Numt, a Recent Transfer and Tandem Amplification of Mitochondrial DNA in the Nuclear Genome of the Domestic Cat, Jose V. Lopez, Naoya Yuhki, Ryuichi Masuda, William Modi, Stephen James O'Brien
Jose Lopez

Rates of Nuclear and Cytoplasmic Mitochondrial DNA Sequence Divergence in Mammals, Jose V. Lopez, Melanie Culver, J. Claiborne Stephens, Warren E. Johnson, Stephen James O'Brien
Jose Lopez

Comparative Analysis of the Domestic Cat Genome Reveals Genetic Signatures Underlying Feline Biology and Domestication, Michael J. Montague, Gang Li, Barbara Gandolfi, Razib Khan, Bronwen L. Aken, Steven M. J. Searle, Patrick Minx, LaDeana W. Hillier, Daniel C. Koboldt, Brian W. Davis, Carlos A. Driscoll, Christina S. Barr, Kevin Blackistone, Javier Quilez, Belen Lorente-Galdos, Tomas Marques-Bonet, Can Alkan, Gregg W. C. Thomas, Matthew W. Hahn, Marilyn Menotti-Raymond, Stephen James O'Brien, Richard K. Wilson, Leslie A. Lyons, William J. Murphy, Wesley C. Warren
Stephen O'Brien

X Chromosome Evolution in Cetartiodactyla, Anastasiya A. Proskuryakova, Anastasia I. Kulemzina, Polina L. Perelman, Alexey I. Makunin, Denis M. Larkin, Marta Farre, Anna V. Kukekova, Jennifer Lynn Johnson, Natalya A. Lemskaya, Violetta R. Beklemisheva, M. Roelke-Parker, June Bellizzi, Oliver A. Ryder, Stephen James O'Brien, Alexander S. Graphodatsky
Stephen O'Brien

Molecular Phylogeny of Mitochondrial Cytochrome b and 12S rRNA Sequences in the Felidae: Ocelot and Domestic Cat Lineages, Ryuichi Masuda, Jose V. Lopez, Jill Pecon Slattery, Naoya Yuhki, Stephen James O'Brien
Stephen O'Brien

Rates of Nuclear and Cytoplasmic Mitochondrial DNA Sequence Divergence in Mammals, Jose V. Lopez, Melanie Culver, J. Claiborne Stephens, Warren E. Johnson, Stephen James O'Brien
Stephen O'Brien

Rapid Evolution of a Heteroplasmic Repetitive Sequence in the Mitochondrial DNA Control Region of Carnivores, A Rus Hoelzel, Jose V. Lopez, Gabriel A. Dover, Stephen James O'Brien
Stephen O'Brien

Numt, a Recent Transfer and Tandem Amplification of Mitochondrial DNA in the Nuclear Genome of the Domestic Cat, Jose V. Lopez, Naoya Yuhki, Ryuichi Masuda, William Modi, Stephen James O'Brien
Stephen O'Brien

X Chromosome Evolution in Cetartiodactyla, Anastasiya A. Proskuryakova, Anastasia I. Kulemzina, Polina L. Perelman, Alexey I. Makunin, Denis M. Larkin, Marta Farre, Anna V. Kukekova, Jennifer Lynn Johnson, Natalya A. Lemskaya, Violetta R. Beklemisheva, M. Roelke-Parker, June Bellizzi, Oliver A. Ryder, Stephen James O'Brien, Alexander S. Graphodatsky
Biology Faculty Articles

Comparative Analysis of the Domestic Cat Genome Reveals Genetic Signatures Underlying Feline Biology and Domestication, Michael J. Montague, Gang Li, Barbara Gandolfi, Razib Khan, Bronwen L. Aken, Steven M. J. Searle, Patrick Minx, LaDeana W. Hillier, Daniel C. Koboldt, Brian W. Davis, Carlos A. Driscoll, Christina S. Barr, Kevin Blackistone, Javier Quilez, Belen Lorente-Galdos, Tomas Marques-Bonet, Can Alkan, Gregg W. C. Thomas, Matthew W. Hahn, Marilyn Menotti-Raymond, Stephen James O'Brien, Richard K. Wilson, Leslie A. Lyons, William J. Murphy, Wesley C. Warren
Biology Faculty Articles

Atlas of Mammalian Chromosomes, Stephen James O'Brien, Joan C. Menninger, William G. Nash
Biology Faculty Books and Book Chapters

Tears of the Cheetah: The Genetic Secrets of Our Animal Ancestors, Stephen James O'Brien
Biology Faculty Books and Book Chapters

Rates of Nuclear and Cytoplasmic Mitochondrial DNA Sequence Divergence in Mammals, Jose V. Lopez, Melanie Culver, J. Claiborne Stephens, Warren E. Johnson, Stephen James O'Brien
Biology Faculty Articles

Molecular Phylogeny of Mitochondrial Cytochrome b and 12S rRNA Sequences in the Felidae: Ocelot and Domestic Cat Lineages, Ryuichi Masuda, Jose V. Lopez, Jill Pecon Slattery, Naoya Yuhki, Stephen James O'Brien
Biology Faculty Articles

Rapid Evolution of a Heteroplasmic Repetitive Sequence in the Mitochondrial DNA Control Region of Carnivores, A Rus Hoelzel, Jose V. Lopez, Gabriel A. Dover, Stephen James O'Brien
Biology Faculty Articles

Numt, a Recent Transfer and Tandem Amplification of Mitochondrial DNA in the Nuclear Genome of the Domestic Cat, Jose V. Lopez, Naoya Yuhki, Ryuichi Masuda, William Modi, Stephen James O'Brien
Biology Faculty Articles

Genetic Maps: Locus Maps of Complex Genomes, Stephen James O'Brien
Biology Faculty Books and Book Chapters