Part of the Genetics and Genomics Commons

Works by Michael W. Smith in Genetics and Genomics

2016

Genome-Wide Association and Trans-ethnic Meta-Analysis for Advanced Diabetic Kidney Disease: Family Investigation of Nephropathy and Diabetes (FIND), Sudha K. Iyengar, John R. Sedor, Barry I. Freedman, W. H. Linda Kao, Matthias Kretzler, Benjamin J. Keller, Hanna E. Abboud, Sharon G. Adler, Lyle G. Best, Donald W. Bowden, Allison Burlock, Yii-Der Ida Chen, Shelley A. Cole, Mary E. Comeau, Jeffrey M. Curtis, Jasmin DIvers, Christiane Drechsler, Ravi Duggirala, Robert C. Elston, Xiuqing Guo, Huateng Huang, Michael M. Hoffmann, Barbara V. Howard, Eli Ipp, Paul L. Kimmel, Michael J. Klag, William C. Knowler, Orly F. Kohn, Tennille S. Leak, David J. Leehey, Man Li, Alka Malhotra, Winfried Marz, Viji Nair, Robert G. Nelson, Susanne B. Nicholas, Stephen J. O'Brien, Madeleine V. Pahl, Rulan S. Parekh, Marcus G. Pezzolesi, Rebekah S. Rasooly, Charles N. Rotimi, Jerome I. Rotter, Jeffrey R. Schelling, Michael F. Seldin, Vallabh O. Shah, Adam M. Smiles, Michael W. Smith, Kent D. Taylor, Farook Thameem, Denyse P. Thornley-Brown, Barbara J. Truitt, Christoph Wanner, E. Jennifer Weil, Cheryl Winkler, Philip G. Zager, Robert P. Igo Jr., Robert L. Hanson, Carl D. Langefeld
Stephen O'Brien

Identifying Selected Regions from Heterozygosity and Divergence Using a Light-Coverage Genomic Dataset from Two Human Populations, T. K. Oleksyk, Kai Zhao, Francisco M. De La Vega, Dennis A. Gilbert, Stephen J. O'Brien, Michael W. Smith
Stephen O'Brien

Significant Admixture Linkage Disequilibrium Across 30 cM Around the FY Locus in African Americans, J. A. Lautenberger, J. Claiborne Stephens, Stephen J. O'Brien, Michael W. Smith
Stephen O'Brien

2015

Genome-Wide Association and Trans-ethnic Meta-Analysis for Advanced Diabetic Kidney Disease: Family Investigation of Nephropathy and Diabetes (FIND), Sudha K. Iyengar, John R. Sedor, Barry I. Freedman, W. H. Linda Kao, Matthias Kretzler, Benjamin J. Keller, Hanna E. Abboud, Sharon G. Adler, Lyle G. Best, Donald W. Bowden, Allison Burlock, Yii-Der Ida Chen, Shelley A. Cole, Mary E. Comeau, Jeffrey M. Curtis, Jasmin DIvers, Christiane Drechsler, Ravi Duggirala, Robert C. Elston, Xiuqing Guo, Huateng Huang, Michael M. Hoffmann, Barbara V. Howard, Eli Ipp, Paul L. Kimmel, Michael J. Klag, William C. Knowler, Orly F. Kohn, Tennille S. Leak, David J. Leehey, Man Li, Alka Malhotra, Winfried Marz, Viji Nair, Robert G. Nelson, Susanne B. Nicholas, Stephen J. O'Brien, Madeleine V. Pahl, Rulan S. Parekh, Marcus G. Pezzolesi, Rebekah S. Rasooly, Charles N. Rotimi, Jerome I. Rotter, Jeffrey R. Schelling, Michael F. Seldin, Vallabh O. Shah, Adam M. Smiles, Michael W. Smith, Kent D. Taylor, Farook Thameem, Denyse P. Thornley-Brown, Barbara J. Truitt, Christoph Wanner, E. Jennifer Weil, Cheryl Winkler, Philip G. Zager, Robert P. Igo Jr., Robert L. Hanson, Carl D. Langefeld, Family Investigation of Nephropathy and Diabetes (FIND) Research Group
Biology Faculty Articles

PDF

2010

Examination of Disease-Based Selection, Demographic History and Population Structure in European Y-Chromosome Haplogroup I, Efe Sezgin, Alyssa Drosdak, Carl McIntosh, Bailey Kessing, J. A. Lautenberger, James J. Goedert, John Phair, Jennifer L. Troyer, Michael W. Smith, Stephen J. O'Brien
Biology Faculty Articles

Effect of Host Genetics on the Development of Cytomegalovirus Retinitis in Patients with AIDS, Efe Sezgin, Douglas A. Jabs, Sher L. Hendrickson, Mark Van Natta, Alexander Zdanov, Richard A. Lewis, Michael W. Smith, Jennifer L. Troyer, Stephen J. O'Brien, SOCA Research Group
Biology Faculty Articles

Genome-Wide Scans for Footprints of Natural Selection, T. K. Oleksyk, Michael W. Smith, Stephen J. O'Brien
Biology Faculty Articles

2009

Association of Y Chromosome Haplogroup I with HIV Progression, and HAART Outcome, Efe Sezgin, Joanne M. Lind, Sadeep Shrestha, Sher L. Hendrickson, James J. Goedert, Sharyne Donfield, Gregory D. Kirk, John Phair, Jennifer L. Troyer, Stephen J. O'Brien, Michael W. Smith
Biology Faculty Articles

2008

Evaluation of IL10, IL19 and IL20 Gene Polymorphisms and Chronic Hepatitis B Infection Outcome, Ann L. Truelove, T. K. Oleksyk, Sadeep Shrestha, Chloe L. Thio, James J. Goedert, Sharyne Donfield, Gregory D. Kirk, David L. Thomas, Stephen J. O'Brien, Michael W. Smith
Biology Faculty Articles

Identifying Selected Regions from Heterozygosity and Divergence Using a Light-Coverage Genomic Dataset from Two Human Populations, T. K. Oleksyk, Kai Zhao, Francisco M. De La Vega, Dennis A. Gilbert, Stephen J. O'Brien, Michael W. Smith
Biology Faculty Articles

PDF

2007

Elevated Male European and Female African Contributions to the Genomes of African American Individuals, Joanne M. Lind, Holli Hutcheson-Dilks, Scott M. Williams, Jason H. Moore, Myron Essex, Eduardo Ruiz-Pesini, Douglas C. Wallace, Sarah A. Tishkoff, Stephen J. O'Brien, Michael W. Smith
Biology Faculty Articles

2005

Mapping by Admixture Linkage Disequilibrium: Advances, Limitations and Guidelines, Michael W. Smith, Stephen J. O'Brien
Biology Faculty Articles

2004

Dominant Effects of CCR2-CCR5 Haplotypes in HIV-1 Disease Progression, Cheryl Winkler, Houria Hendel, Mary Carrington, Michael W. Smith, George W. Nelson, Stephen J. O'Brien, John Phair, David Vlahov, Lisa Jacobson, Jay Rappaport, Alexandre Vasilescu, Sebastien Berlin-Maghit, Ping An, Wei Lu, Jean-Marie Andrieu, Francois Schachter, Amu Therwath, Jean-Francois Zagury
Biology Faculty Articles

2003

Non-Hodgkin's B Cell Lymphoma in Persons with Acquired Immunodeficiency Syndrome is Associated with Increased Serum Levels of IL10, or the IL10 Promoter −592 C/C Genotype, Elizabeth Crabb Breen, W. John Boscardin, Roger Detels, Lisa Jacobson, Michael W. Smith, Stephen J. O'Brien, Joan S. Chmiel, Charles Rinaldo, Shenghan Lai, Otoniel Martinez-Maza
Biology Faculty Articles

2001

Markers for Mapping by Admixture Linkage Disequilibrium in African American and Hispanic Populations, Michael W. Smith, J. A. Lautenberger, Hyoung Doo Shin, Jean-Paul Chretien, Sadeep Shrestha, Dennis A. Gilbert, Stephen J. O'Brien
Biology Faculty Articles

2000

Genetic Restriction of HIV-1 Pathogenesis to AIDS by Promoter Alleles of IL10, Hyoung Doo Shin, Cheryl Winkler, J. Claiborne Stephens, Jay Bream, Howard Young, James J. Goedert, Thomas R. O'Brien, David Vlahov, Susan Buchbinder, Janis Giorgi, Charles Rinaldo, Sharyne Donfield, Anne Willoughby, Stephen J. O'Brien, Michael W. Smith
Biology Faculty Articles

Influence of CCR5 Promoter Haplotypes on AIDS Progression in African–Americans, Ping An, Maureen P. Martin, George W. Nelson, Mary Carrington, Michael W. Smith, Kui Gong, David Vlahov, Stephen J. O'Brien, Cheryl Winkler
Biology Faculty Articles

Significant Admixture Linkage Disequilibrium Across 30 cM Around the FY Locus in African Americans, J. A. Lautenberger, J. Claiborne Stephens, Stephen J. O'Brien, Michael W. Smith
Biology Faculty Articles

Polygenic and Multifactorial Disease Gene Association in Man: Lessons from AIDS, Stephen J. O'Brien, George W. Nelson, Cheryl Winkler, Michael W. Smith
Biology Faculty Articles

1999

A Scan for Linkage Disequilibrium Across the Human Genome, Gavin A. Huttley, Michael W. Smith, Mary Carrington, Stephen J. O'Brien
Biology Faculty Articles

CCR5 Promoter Alleles and Specific DNA Binding Factors, Jay Bream, Howard A. Young, Nancy Rice, Maureen P. Martin, Michael W. Smith, Mary Carrington, Stephen J. O'Brien
Biology Faculty Articles

1998

Distinctive Effects of CCR5, CCR2, and SDF1 Genetic Polymorphisms in AIDS Progression, Houria Hendel, N. Henon, Helene Lebuanec, Abderrahim Lachgar, H. Poncelet, Sophie Caillat-Zucman, Cheryl Winkler, Michael W. Smith, L. Kenefic, Stephen J. O'Brien, W. Lu, Jean-Marie Andrieu, Daniel Zagury, Francois Schachter, Jay Rappaport, Jean-Francois Zagury
Biology Faculty Articles

Genetic Acceleration of AIDS Progression by a Promoter Variant of CCR5, Maureen P. Martin, Michael Dean, Michael W. Smith, Cheryl Winkler, Bernard Gerrard, Nelson L. Michael, Benhur Lee, Robert W. Doms, Joseph Margolick, Susan Buchbinder, James J. Goedert, Thomas R. O'Brien, Margaret Hilgartner, David Vlahov, Stephen J. O'Brien, Mary Carrington
Biology Faculty Articles

Dating the Origin of the CCR5-Δ32 AIDS-Resistance Allele by the Coalescence of Haplotypes, J. Claiborne Stephens, David E. Riech, David B. Goldstein, Hyoung Doo Shin, Michael W. Smith, Mary Carrington, Cheryl Winkler, Gavin A. Huttley, Rando Allikmets, Lynn Schriml, Bernard Gerrard, Michael Malasky, Maria D. Ramos, Susanne Morlot, Maria Tzetis, Carole Oddoux, Francesco S. di Giovine, Georgios Nasioulas, David Chandler, Michael Aseev, Matthew Hanson, Luba Kalaydjieva, Damjan Glavac, Paolo Gasparini, E. Kanavakis, Mireille Claustres, Marios Kambouris, Harry Ostrer, Gordon Duff, Vladislav Baranov, Hiljar Sibul, Andres Metspalu, David Goldman, Nick Martin, David Duffy, Jorg Schmidtke, Xavier Estivill, Stephen J. O'Brien, Michael Dean
Biology Faculty Articles

Progression to AIDS, Sharyne Donfield, Henry S. Lynn, Margaret Hilgartner, Michael W. Smith, Michael Dean, Mary Carrington, Cheryl Winkler, Stephen J. O'Brien
Biology Faculty Articles

Genetic Restriction of AIDS Pathogenesis by an SDF-1 Chemokine Gene Variant, Cheryl Winkler, William Modi, Michael W. Smith, George W. Nelson, Xueyun Wu, Mary Carrington, Michael Dean, Tasaku Honjo, Kai Tashiro, D. Yabe, Susan Buchbinder, Eric Vittinghoff, James J. Goedert, Thomas R. O'Brien, Lisa Jacobson, Roger Detels, Sharyne Donfield, Anne Willoughby, Edward Gomperts, David Vlahov, John Phair, ALIVE Study, Hemophilia Growth and Development Study, Multicenter AIDS Cohort Study, Multicenter Hemophilia Cohort Study, San Francisco City Cohort, Stephen J. O'Brien
Biology Faculty Articles

1997

CCR2 Chemokine Receptor and AIDS Progression, Michael W. Smith, Mary Carrington, Cheryl Winkler, Deborah A. Lomb, Michael Dean, Gavin A. Huttley, Stephen J. O'Brien
Biology Faculty Articles

CCR5-Δ32 Gene Deletion in HIV-1 Infected Patients, Michael W. Smith, Michael Dean, Mary Carrington, Gavin A. Huttley, Stephen J. O'Brien
Biology Faculty Articles

Contrasting Genetic Influence of CCR2 and CCR5 Variants on HIV-1 Infection and Disease Progression, Michael W. Smith, Michael Dean, Mary Carrington, Cheryl Winkler, Gavin A. Huttley, Deborah A. Lomb, James J. Goedert, Thomas R. O'Brien, Lisa Jacobson, Richard A. Kaslow, Susan Buchbinder, Eric Vittinghoff, David Vlahov, Keith Hoots, Margaret Hilgartner, Hemophilia Growth and Development Study, Multicenter AIDS Cohort Study, Multicenter Hemophilia Cohort Study, San Francisco City Cohort, ALIVE Study, Stephen J. O'Brien
Biology Faculty Articles

1996

Genetic Restriction of HIV-1 Infection and Progression to AIDS by a Deletion Allele of the CKR5 Structural Gene, Michael Dean, Mary Carrington, Cheryl Winkler, Gavin A. Huttley, Michael W. Smith, Rando Allikmets, James J. Goedert, Susan Buchbinder, Eric Vittinghoff, Edward Gomperts, Sharyne Donfield, David Vlahov, Richard A. Kaslow, A. J. Saah, Charles Rinaldo, Roger Detels, Hemophilia Growth and Development Study, Multicenter AIDS Cohort Study, Multicenter Hemophilia Cohort Study, San Francisco City Cohort, Stephen J. O'Brien
Biology Faculty Articles