Part of the Genetics and Genomics Commons

Works by Mahmood S. Shivji in Genetics and Genomics

2021

Commentary: Unbiasing Genome-Based Analyses of Selection: An Example Using Iconic Shark Species, Nicholas J. Marra, Michael J. Stanhope, Nathaniel K. Jue, Vincent P. Richards, Stephen J. O'Brien, Agostinho Antunes, Mahmood S. Shivji
Stephen O'Brien

Commentary: Unbiasing Genome-Based Analyses of Selection: An Example Using Iconic Shark Species, Nicholas J. Marra, Michael J. Stanhope, Nathaniel K. Jue, Vincent P. Richards, Stephen J. O'Brien, Agostinho Antunes, Mahmood S. Shivji
Mahmood Shivji

The Ups and Downs of Coral Reef Fishes: The Genetic Characteristics of a Formerly Severely Overfished but Currently Recovering Nassau Grouper Fish Spawning Aggregation, Andrea M. Bernard, Kevin Feldheim, Richard S. Nemeth, Elizabeth Kadison, Jeremiah Blondeau, Mahmood S. Shivji
Mahmood Shivji

Commentary: Unbiasing Genome-Based Analyses of Selection: An Example Using Iconic Shark Species, Nicholas J. Marra, Michael J. Stanhope, Nathaniel K. Jue, Vincent P. Richards, Stephen J. O'Brien, Agostinho Antunes, Mahmood S. Shivji
Biology Faculty Articles

2019

White Shark Genome Reveals Ancient Elasmobranch Adaptations Associated with Wound Healing and the Maintenance of Genome Stability, Nicholas J. Marra, Michael J. Stanhope, Nathaniel K. Jue, Minghui Wang, Qi Sun, Paulina D. Pavinski Bitar, Vincent P. Richards, Aleksey S. Komissarov, Mike Rayko, Sergey Kliver, Bryce J. Stanhope, Chuck Winkler, Stephen James O'Brien, Agostinho Antunes, Salvador Jorgensen, Mahmood S. Shivji
Stephen O'Brien

White Shark Genome Reveals Ancient Elasmobranch Adaptations Associated with Wound Healing and the Maintenance of Genome Stability, Nicholas J. Marra, Michael J. Stanhope, Nathaniel K. Jue, Minghui Wang, Qi Sun, Paulina D. Pavinski Bitar, Vincent P. Richards, Aleksey S. Komissarov, Mike Rayko, Sergey Kliver, Bryce J. Stanhope, Chuck Winkler, Stephen James O'Brien, Agostinho Antunes, Salvador Jorgensen, Mahmood S. Shivji
Mahmood Shivji

White Shark Genome Reveals Ancient Elasmobranch Adaptations Associated with Wound Healing and the Maintenance of Genome Stability, Nicholas J. Marra, Michael J. Stanhope, Nathaniel K. Jue, Minghui Wang, Qi Sun, Paulina D. Pavinski Bitar, Vincent P. Richards, Aleksey S. Komissarov, Mike Rayko, Sergey Kliver, Bryce J. Stanhope, Chuck Winkler, Stephen James O'Brien, Agostinho Antunes, Salvador Jorgensen, Mahmood S. Shivji
Biology Faculty Articles

PDF

DNA sequences of mitochondrial Cytochrome c oxidase I (COI) genes from deep sea fishes collected during DEEPEND cruise DP05 from 2017-05-01 to 2017-05-11, Kimberly A. Finnegan, Andrea Bernard, M. Weber, Ron Eytan, Mahmood S. Shivji
Mahmood Shivji

DNA sequences of mitochondrial Cytochrome c oxidase I (COI) genes from deep sea fishes collected during DEEPEND cruise DP05 from 2017-05-01 to 2017-05-11, Kimberly A. Finnegan, Andrea Bernard, M. Weber, Ron Eytan, Mahmood S. Shivji
Andrea Bernard

Genetic Connectivity and Phylogeography of the Night Shark (Carcharhinus signatus) in the Western Atlantic Ocean: Implications for Conservation Management, Rodrigo R. Domingues, Christine C. Bruels, Otto B. F. Gadig, Demian D. Chapman, Alexandre W. S. Hilsdorf, Mahmood S. Shivji
Mahmood Shivji

Deep Mitochondrial Lineage Divergence Among Populations of the Southern Stingray (Hypanus americanus (Hildebrand & Schroeder, 1928)) Throughout the Southeastern United States and Caribbean, Vincent P. Richards, Melissa B. DeBiasse, Mahmood S. Shivji
Mahmood Shivji

2018

Deep Mitochondrial Lineage Divergence Among Populations of the Southern Stingray (Hypanus americanus (Hildebrand & Schroeder, 1928)) Throughout the Southeastern United States and Caribbean, Vincent P. Richards, Melissa B. DeBiasse, Mahmood S. Shivji
Biology Faculty Articles

Genetic Connectivity and Phylogeography of the Night Shark (Carcharhinus signatus) in the Western Atlantic Ocean: Implications for Conservation Management, Rodrigo R. Domingues, Christine C. Bruels, Otto B. F. Gadig, Demian D. Chapman, Alexandre W. S. Hilsdorf, Mahmood S. Shivji
Biology Faculty Articles

DNA sequences of the mitochondrial Cytochrome c oxidase I (COI) genes from deep sea fishes, cruises DP03 and DP04 from May 2016 - August 2016, Max Weber, Kimberly A. Finnegan, Andrea Bernard, Ron Eytan, Mahmood S. Shivji
Andrea Bernard

DNA sequences of the mitochondrial Cytochrome c oxidase I (COI) genes from deep sea fishes, cruises DP03 and DP04 from May 2016 - August 2016, Max Weber, Kimberly A. Finnegan, Andrea Bernard, Ron Eytan, Mahmood S. Shivji
DEEPEND Datasets

DNA sequences of mitochondrial Cytochrome c oxidase I (COI) genes from deep sea fishes collected during DEEPEND cruise DP05 from 2017-05-01 to 2017-05-11, Kimberly A. Finnegan, Andrea Bernard, M. Weber, Ron Eytan, Mahmood S. Shivji
DEEPEND Datasets

2017

DNA sequences of the mitochondrial Cytochrome c oxidase I (COI) genes from deep sea fishes. Cruises DP01 and DP02 from May 2015 - August 2015, Andrea Bernard, Max Weber, Kimberly A. Finnegan, Mahmood S. Shivji, Ron Eytan
Mahmood Shivji

Cryptic Hammerhead Shark Lineage Occurrence in the Western South Atlantic Revealed by DNA Analysis, D. Pinhal, Mahmood S. Shivji, M. Vallinoto, Demian D. Chapman, O. B. F. Gadig, C. Martins
Mahmood Shivji

Applying Genetic Techniques to Study Remote Shark Fisheries in Northeastern Madagascar, Phaedra Doukakis, Robert H. Hanner, Mahmood S. Shivji, Cecilia Bartholomew, Demian D. Chapman, Eugene Wong, George Amato
Mahmood Shivji

Characterization of the Pelagic Shark-Fin Trade in North-Central Chile by Genetic Identification and Trader Surveys, H. Sebastian, P. A. Haye, Mahmood S. Shivji
Mahmood Shivji

Effects of the Pleistocene on the Mitochondrial Population Genetic Structure and Demographic History of the Silky Shark (Carcharhinus falciformis) in the Western Atlantic Ocean, Rodrigo R. Domingues, Alexandre W. S. Hilsdorf, Mahmood S. Shivji, Fabio H.V. Hazin, O. B. F. Gadig
Mahmood Shivji

Comparative Transcriptomics of Elasmobranchs and Teleosts Highlight Important Processes in Adaptive Immunity and Regional Endothermy, Nicholas J. Marra, Vincent P. Richards, Angela Early, Steve M. Bogdanowicz, Paulina D. Pavinski Bitar, Michael J. Stanhope, Mahmood S. Shivji
Mahmood Shivji

Genetic Profiling Reveals Illegal International Trade in Fins of the Great White Shark, Carcharodon carcharias, Mahmood S. Shivji, Demian D. Chapman, Ellen K. Pikitch, Paul W. Raymond
Mahmood Shivji

Genetic Diversity of White Sharks, Carcharodon carcharias, in the Northwest Atlantic and Southern Africa, Shannon J. O'Leary, Kevin A. Feldheim, Andrew T. Fields, Lisa Natanson, Sabine Wintner, Nigel Hussey, Mahmood S. Shivji, Demian D. Chapman
Mahmood Shivji

Effects of Species Misidentification on Population Assessment of Overfished White Marlin Tetrapturus albidus and Roundscale Spearfish T. georgii, Lawrence R. Beerkircher, Freddy Arocha, Ann Barse, Eric D. Prince, Victor Restrepo, Joseph Serafy, Mahmood S. Shivji
Mahmood Shivji

Development and Characterization of 10 Polymorphic Microsatellite Loci for the Blue Shark, Prionace glauca, and Their Cross Shark-Species Amplification, Sean Fitzpatrick, Mahmood S. Shivji, Demian D. Chapman, Paulo A. Prodohl
Mahmood Shivji

Global Estimates of Shark Catches Using Trade Records From Commercial Markets, Shelley C. Clarke, Murdoch K. McAllister, E. J. Milner-Gulland, G. P. Kirkwood, Catherine G. J. Michielsens, David J. Agnew, Ellen K. Pikitch, Hideki Nakano, Mahmood S. Shivji
Mahmood Shivji

Genetic Identification of Pelagic Shark Body Parts for Conservation and Trade Monitoring, Mahmood S. Shivji, Shelley C. Clarke, Melissa Pank, Lisa Natanson, Nancy Kohler
Mahmood Shivji

Molecular Phylogenetic Evidence Refuting the Hypothesis of Batoidea (Rays and Skates) as Derived Sharks, C. J. Douady, Mine Dosay, Mahmood S. Shivji, Michael Stanhope
Mahmood Shivji

Identification of the Larval and Juvenile Stages of the Cubera Snapper, Lutjanus cyanopterus, Using DNA Barcoding, Benjamin C. Victor, Robert H. Hanner, Mahmood S. Shivji, John Hyde, Chris Caldow
Mahmood Shivji

Shark Virgin Birth Produces Multiple, Viable Offspring, Kevin A. Feldheim, Demian D. Chapman, Doug Sweet, Sean Fitzpatrick, Paulo A. Prodohl, Mahmood S. Shivji, Bob Snowden
Mahmood Shivji

Shark Diversity in the Arabian/Persian Gulf Higher Than Previously Thought: Insights Based on Species Composition of Shark Landings in the United Arab Emirates, Rima W. Jabado, Saif M. Al Ghais, Waleed Hamza, Mahmood S. Shivji, Aaron C. Henderson
Mahmood Shivji

Parthenogenesis in a Large-Bodied Requiem Shark, the Blacktip Carcharhinus limbatus, Demian D. Chapman, B. Firchau, Mahmood S. Shivji
Mahmood Shivji

Low Worldwide Genetic Diversity in the Basking Shark (Cetorhinus maximus), A. Rus Hoelzel, Mahmood S. Shivji, Jennifer E. Magnussen, Malcom Francis
Mahmood Shivji

Mammalian Evolution and the Interphotoreceptor Retinoid Binding Protein (IRBP) Gene: Convincing Evidence for Several Superordinal Clades, Michael Stanhope, Marta R. Smith, Victor G. Waddell, Calvin A. Porter, Mahmood S. Shivji, Morris Goodman
Mahmood Shivji

The Larval, Juvenile, and Adult Stages of the Caribbean Goby, Coryphopterus kuna (Teleostei: Gobiidae): A Reef Fish with a Pelagic Larval Duration Longer Than the Post-Settlement Lifespan, Benjamin C. Victor, Lourdes Vasquez-Yeomans, Martha Valdez-Moreno, Leslie Wilk, David L. Jones, Monica R. Lara, Chris Caldow, Mahmood S. Shivji
Mahmood Shivji

The Complete Mitochondrial Genome of the Endangered Great Hammerhead Shark, Sphyrna mokarran, Cassandra L. Ruck, Nicholas J. Marra, Mahmood S. Shivji, Michael Stanhope
Mahmood Shivji

The Complete Mitochondrial Genome of the Critically Endangered Angelshark, Squatina squatina, Cristin Keelin Fitzpatrick, Kimberly A. Finnegan, Filip Osaer, Krupskaya Narvaez, Mahmood S. Shivji
Mahmood Shivji

Comparative Population Genetics and Evolutionary History of Two Commonly Misidentified Billfishes of Management and Conservation Concern, Andrea M. Bernard, Mahmood S. Shivji, Eric Prince, Fabio H.V. Hazin, Freddy Arocha, Andres Domingo, Kevin A. Feldheim
Andrea Bernard

Development and Characterization of 11 Novel Microsatellite Loci for the Roundscale Spearfish Tetrapturus georgii and Their Cross-Species Amplification Among Other Istiophorid Species, Andrea M. Bernard, Kevin A. Feldheim, Mahmood S. Shivji
Andrea Bernard

Effects of the Pleistocene on the Mitochondrial Population Genetic Structure and Demographic History of the Silky Shark (Carcharhinus falciformis) in the Western Atlantic Ocean, Rodrigo R. Domingues, Alexandre W. S. Hilsdorf, Mahmood S. Shivji, Fabio H.V. Hazin, O. B. F. Gadig
Biology Faculty Articles

DNA sequences of the mitochondrial Cytochrome c oxidase I (COI) genes from deep sea fishes. Cruises DP01 and DP02 from May 2015 - August 2015, Andrea Bernard, Max Weber, Kimberly A. Finnegan, Mahmood S. Shivji, Ron Eytan
DEEPEND Datasets

The Complete Mitochondrial Genome of the Critically Endangered Angelshark, Squatina squatina, Cristin Keelin Fitzpatrick, Kimberly A. Finnegan, Filip Osaer, Krupskaya Narvaez, Mahmood S. Shivji
Biology Faculty Articles

The Complete Mitochondrial Genome of the Endangered Great Hammerhead Shark, Sphyrna mokarran, Cassandra L. Ruck, Nicholas J. Marra, Mahmood S. Shivji, Michael Stanhope
Biology Faculty Articles

Comparative Transcriptomics of Elasmobranchs and Teleosts Highlight Important Processes in Adaptive Immunity and Regional Endothermy, Nicholas J. Marra, Vincent P. Richards, Angela Early, Steve M. Bogdanowicz, Paulina D. Pavinski Bitar, Michael J. Stanhope, Mahmood S. Shivji
Biology Faculty Articles

PDF

2016

Broad Geographic Distribution of Roundscale Spearfish (Tetrapturus georgii) (Teleostei, Istiophoridae) in the Atlantic Revealed by DNA Analysis: Implications for White Marlin and Roundscale Spearfish Management, Andrea M. Bernard, Mahmood S. Shivji, Rodrigo Rodrigues Domingues, Fabio Hissa Vieira Hazin, Alberto Ferreira de Amorim, Andres Domingo, Freddy Arocha, Eric D. Prince, John P. Hoolihan, Alexandre Wagner Silva Hilsdorf
Mahmood Shivji

A Streamlined, Bi-Organelle, Multiplex PCR Approach to Species Identification: Application to Global Conservation and Trade Monitoring of the Great White Shark, Carcharodon carcharias, Demian D. Chapman, Debra Abercrombie, Christophe J. Douady, Ellen K. Pikitch, Michael Stanhope, Mahmood S. Shivji
Mahmood Shivji

A Streamlined DNA Tool for Global Identification of Heavily Exploited Coastal Shark Species (Genus Rhizoprionodon), D. Pinhal, Mahmood S. Shivji, Pedro G. Nachtigall, Demian D. Chapman, Cesar Martins
Mahmood Shivji

Characterization of the Heart Transcriptome of the White Shark (Carcharodon carcharias), Vincent P. Richards, Haruo Suzuki, Michael J. Stanhope, Mahmood S. Shivji
Mahmood Shivji

Comparative Population Genetics and Evolutionary History of Two Commonly Misidentified Billfishes of Management and Conservation Concern, Andrea M. Bernard, Mahmood S. Shivji, Eric Prince, Fabio H.V. Hazin, Freddy Arocha, Andres Domingo, Kevin A. Feldheim
Mahmood Shivji

Development and Characterization of Thirteen Microsatellite Markers for the Longbill Spearfish (Tetrapturus pfluegeri), Andrea M. Bernard, A. W. S. Hilsdorf, A. F. Amorim, Rodrigo Rodrigues Domingues, Mahmood S. Shivji
Mahmood Shivji

Development and Characterization of Fifteen Novel Microsatellite Loci for the Nassau Grouper (Epinephelus striatus) and Their Utility for Cross-Amplification on a Suite of Closely Related Species, Andrea M. Bernard, Kevin A. Feldheim, Vincent P. Richards, Richard S. Nemeth, Mahmood S. Shivji
Mahmood Shivji

Development and Characterization of 11 Novel Microsatellite Loci for the Roundscale Spearfish Tetrapturus georgii and Their Cross-Species Amplification Among Other Istiophorid Species, Andrea M. Bernard, Kevin A. Feldheim, Mahmood S. Shivji
Mahmood Shivji

Genetic Tracking of Basking Shark Products in International Trade, Jennifer E. Magnussen, Ellen K. Pikitch, S. C. Clarke, C. Nicholson, A. Rus Hoelzel, Mahmood S. Shivji
Mahmood Shivji

Genetic Evidence Supports Larval Retention in the Western Caribbean for an Invertebrate With High Dispersal Capability (Ophiothrix suensonii: Echinodermata, Ophiuroidea), Vincent P. Richards, Melissa B. DeBiasse, Mahmood S. Shivji
Mahmood Shivji

Genetic Connectivity in the Florida Reef System: Comparative Phylogeography of Commensal Invertebrates With Contrasting Reproductive Strategies, Vincent P. Richards, James Darwin Thomas, Michael J. Stanhope, Mahmood S. Shivji
Mahmood Shivji

Identification of Shark Species Composition and Proportion in the Hong Kong Shark Fin Market Based on Molecular Genetics and Trade Records, Shelley C. Clarke, Jennifer E. Magnussen, Debra Abercrombie, Murdoch K. McAllister, Mahmood S. Shivji
Mahmood Shivji

Global-Scale Genetic Identification of Hammerhead Sharks: Application to Assessment of the International Fin Trade and Law Enforcement, Debra Abercrombie, Shelley C. Clarke, Mahmood S. Shivji
Mahmood Shivji

Morphometric Convergence and Molecular Divergence: the Taxonomic Status and Evolutionary History of Gymnura crebripunctata and Gymnura marmorata in the Eastern Pacific Ocean, W. D. Smith, J. J. Bizzarro, Vincent P. Richards, J. Nielsen, F. Marquez-Flarias, Mahmood S. Shivji
Mahmood Shivji

Polymorphic Microsatellite Markers for Studies of the Conservation and Reproductive Genetics of Imperilled Sand Tiger Sharks (Carcharias taurus), Kevin A. Feldheim, Adam J. Stow, Heidi Ahonen, Demian D. Chapman, Mahmood S. Shivji, Vic Peddemors, Sabine Wintner
Mahmood Shivji

Rapid and Simultaneous Identification of Body Parts from the Morphologically Similar Sharks Carcharhinus obscurus and Carcharhinus plumbeus (Carcharhinidae) Using Multiplex PCR, Melissa Pank, Michael Stanhope, Lisa Natanson, Nancy Kohler, Mahmood S. Shivji
Mahmood Shivji

Predominance of Genetic Monogamy by Females in a Hammerhead Shark, Sphyrna tiburo: Implications for Shark Conservation, Demian D. Chapman, Paulo A. Prodohl, James Gelsleichter, Charles A. Manire, Mahmood S. Shivji
Mahmood Shivji

Phylogenetic Evidence from the IRBP Gene for the Paraphyly of Toothed Whales, with Mixed Support for Cetacea as a Suborder of Artiodactyla, Marta R. Smith, Mahmood S. Shivji, Victor G. Waddell, Michael Stanhope
Mahmood Shivji

Species Delineation and Evolutionary History of the Globally Distributed Spotted Eagle Ray (Aetobatus narinari), Vincent P. Richards, Marcy Henning, Wayne Witzell, Mahmood S. Shivji
Mahmood Shivji

Virgin Birth in a Hammerhead Shark, Demian D. Chapman, Mahmood S. Shivji, Ed Louis, Julie Sommer, Hugh Fletcher, Paulo A. Prodohl
Mahmood Shivji

The Behavioural and Genetic Mating System of the Sand Tiger Shark, Carcharias taurus, an Intrauterine Cannibal, Demian D. Chapman, Sabine Wintner, Debra L. Abercrombie, Jimiane Ashe, Andrea M. Bernard, Mahmood S. Shivji, Kevin A. Feldheim
Mahmood Shivji

Validity, Identification, and Distribution of the Roundscale Spearfish, Tetrapturus georgii (Teleostei: Istiophoridae): Morphological and Molecular Evidence, Mahmood S. Shivji, Jennifer E. Magnussen, Lawrence R. Beerkircher, George Hinteregger, Dennis W. Lee, Joseph E. Serafy, Eric D. Prince
Mahmood Shivji

The Ups and Downs of Coral Reef Fishes: The Genetic Characteristics of a Formerly Severely Overfished but Currently Recovering Nassau Grouper Fish Spawning Aggregation, Andrea M. Bernard, Kevin Feldheim, Richard S. Nemeth, Elizabeth Kadison, Jeremiah Blondeau, Mahmood S. Shivji
Marine & Environmental Sciences Faculty Articles

2015

Shark Diversity in the Arabian/Persian Gulf Higher Than Previously Thought: Insights Based on Species Composition of Shark Landings in the United Arab Emirates, Rima W. Jabado, Saif M. Al Ghais, Waleed Hamza, Mahmood S. Shivji, Aaron C. Henderson
Biology Faculty Articles

Genetic Diversity of White Sharks, Carcharodon carcharias, in the Northwest Atlantic and Southern Africa, Shannon J. O'Leary, Kevin A. Feldheim, Andrew T. Fields, Lisa Natanson, Sabine Wintner, Nigel Hussey, Mahmood S. Shivji, Demian D. Chapman
Biology Faculty Articles

Genetic Evidence Supports Larval Retention in the Western Caribbean for an Invertebrate With High Dispersal Capability (Ophiothrix suensonii: Echinodermata, Ophiuroidea), Vincent P. Richards, Melissa B. DeBiasse, Mahmood S. Shivji
Marine & Environmental Sciences Faculty Articles

2014

Comparative Population Genetics and Evolutionary History of Two Commonly Misidentified Billfishes of Management and Conservation Concern, Andrea M. Bernard, Mahmood S. Shivji, Eric Prince, Fabio H.V. Hazin, Freddy Arocha, Andres Domingo, Kevin A. Feldheim
Marine & Environmental Sciences Faculty Articles

PDF

2013

Development and Characterization of Thirteen Microsatellite Markers for the Longbill Spearfish (Tetrapturus pfluegeri), Andrea M. Bernard, A. W. S. Hilsdorf, A. F. Amorim, Rodrigo Rodrigues Domingues, Mahmood S. Shivji
Marine & Environmental Sciences Faculty Articles

The Behavioural and Genetic Mating System of the Sand Tiger Shark, Carcharias taurus, an Intrauterine Cannibal, Demian D. Chapman, Sabine Wintner, Debra L. Abercrombie, Jimiane Ashe, Andrea M. Bernard, Mahmood S. Shivji, Kevin A. Feldheim
Marine & Environmental Sciences Faculty Articles

Broad Geographic Distribution of Roundscale Spearfish (Tetrapturus georgii) (Teleostei, Istiophoridae) in the Atlantic Revealed by DNA Analysis: Implications for White Marlin and Roundscale Spearfish Management, Andrea M. Bernard, Mahmood S. Shivji, Rodrigo Rodrigues Domingues, Fabio Hissa Vieira Hazin, Alberto Ferreira de Amorim, Andres Domingo, Freddy Arocha, Eric D. Prince, John P. Hoolihan, Alexandre Wagner Silva Hilsdorf
Marine & Environmental Sciences Faculty Articles

Characterization of the Heart Transcriptome of the White Shark (Carcharodon carcharias), Vincent P. Richards, Haruo Suzuki, Michael J. Stanhope, Mahmood S. Shivji
Marine & Environmental Sciences Faculty Articles

PDF

2012

Development and Characterization of Fifteen Novel Microsatellite Loci for the Nassau Grouper (Epinephelus striatus) and Their Utility for Cross-Amplification on a Suite of Closely Related Species, Andrea M. Bernard, Kevin A. Feldheim, Vincent P. Richards, Richard S. Nemeth, Mahmood S. Shivji
Marine & Environmental Sciences Faculty Articles

Development and Characterization of 11 Novel Microsatellite Loci for the Roundscale Spearfish Tetrapturus georgii and Their Cross-Species Amplification Among Other Istiophorid Species, Andrea M. Bernard, Kevin A. Feldheim, Mahmood S. Shivji
Marine & Environmental Sciences Faculty Articles

PDF

Cryptic Hammerhead Shark Lineage Occurrence in the Western South Atlantic Revealed by DNA Analysis, D. Pinhal, Mahmood S. Shivji, M. Vallinoto, Demian D. Chapman, O. B. F. Gadig, C. Martins
Biology Faculty Articles

A Streamlined DNA Tool for Global Identification of Heavily Exploited Coastal Shark Species (Genus Rhizoprionodon), D. Pinhal, Mahmood S. Shivji, Pedro G. Nachtigall, Demian D. Chapman, Cesar Martins
Marine & Environmental Sciences Faculty Articles

PDF

2011

Applying Genetic Techniques to Study Remote Shark Fisheries in Northeastern Madagascar, Phaedra Doukakis, Robert H. Hanner, Mahmood S. Shivji, Cecilia Bartholomew, Demian D. Chapman, Eugene Wong, George Amato
Biology Faculty Articles

Development and Characterization of 10 Polymorphic Microsatellite Loci for the Blue Shark, Prionace glauca, and Their Cross Shark-Species Amplification, Sean Fitzpatrick, Mahmood S. Shivji, Demian D. Chapman, Paulo A. Prodohl
Biology Faculty Articles

2010

Shark Virgin Birth Produces Multiple, Viable Offspring, Kevin A. Feldheim, Demian D. Chapman, Doug Sweet, Sean Fitzpatrick, Paulo A. Prodohl, Mahmood S. Shivji, Bob Snowden
Biology Faculty Articles

The Larval, Juvenile, and Adult Stages of the Caribbean Goby, Coryphopterus kuna (Teleostei: Gobiidae): A Reef Fish with a Pelagic Larval Duration Longer Than the Post-Settlement Lifespan, Benjamin C. Victor, Lourdes Vasquez-Yeomans, Martha Valdez-Moreno, Leslie Wilk, David L. Jones, Monica R. Lara, Chris Caldow, Mahmood S. Shivji
Biology Faculty Articles

2009

Morphometric Convergence and Molecular Divergence: the Taxonomic Status and Evolutionary History of Gymnura crebripunctata and Gymnura marmorata in the Eastern Pacific Ocean, W. D. Smith, J. J. Bizzarro, Vincent P. Richards, J. Nielsen, F. Marquez-Flarias, Mahmood S. Shivji
Marine & Environmental Sciences Faculty Articles

Identification of the Larval and Juvenile Stages of the Cubera Snapper, Lutjanus cyanopterus, Using DNA Barcoding, Benjamin C. Victor, Robert H. Hanner, Mahmood S. Shivji, John Hyde, Chris Caldow
Biology Faculty Articles

Species Delineation and Evolutionary History of the Globally Distributed Spotted Eagle Ray (Aetobatus narinari), Vincent P. Richards, Marcy Henning, Wayne Witzell, Mahmood S. Shivji
Marine & Environmental Sciences Faculty Articles

Effects of Species Misidentification on Population Assessment of Overfished White Marlin Tetrapturus albidus and Roundscale Spearfish T. georgii, Lawrence R. Beerkircher, Freddy Arocha, Ann Barse, Eric D. Prince, Victor Restrepo, Joseph Serafy, Mahmood S. Shivji
Biology Faculty Articles

2008

Characterization of the Pelagic Shark-Fin Trade in North-Central Chile by Genetic Identification and Trader Surveys, H. Sebastian, P. A. Haye, Mahmood S. Shivji
Biology Faculty Articles

Parthenogenesis in a Large-Bodied Requiem Shark, the Blacktip Carcharhinus limbatus, Demian D. Chapman, B. Firchau, Mahmood S. Shivji
Biology Faculty Articles

2007

Polymorphic Microsatellite Markers for Studies of the Conservation and Reproductive Genetics of Imperilled Sand Tiger Sharks (Carcharias taurus), Kevin A. Feldheim, Adam J. Stow, Heidi Ahonen, Demian D. Chapman, Mahmood S. Shivji, Vic Peddemors, Sabine Wintner
Marine & Environmental Sciences Faculty Articles

Virgin Birth in a Hammerhead Shark, Demian D. Chapman, Mahmood S. Shivji, Ed Louis, Julie Sommer, Hugh Fletcher, Paulo A. Prodohl
Marine & Environmental Sciences Faculty Articles

Genetic Tracking of Basking Shark Products in International Trade, Jennifer E. Magnussen, Ellen K. Pikitch, S. C. Clarke, C. Nicholson, A. Rus Hoelzel, Mahmood S. Shivji
Marine & Environmental Sciences Faculty Articles

Genetic Connectivity in the Florida Reef System: Comparative Phylogeography of Commensal Invertebrates With Contrasting Reproductive Strategies, Vincent P. Richards, James Darwin Thomas, Michael J. Stanhope, Mahmood S. Shivji
Marine & Environmental Sciences Faculty Articles

2006

Low Worldwide Genetic Diversity in the Basking Shark (Cetorhinus maximus), A. Rus Hoelzel, Mahmood S. Shivji, Jennifer E. Magnussen, Malcom Francis
Biology Faculty Articles

Validity, Identification, and Distribution of the Roundscale Spearfish, Tetrapturus georgii (Teleostei: Istiophoridae): Morphological and Molecular Evidence, Mahmood S. Shivji, Jennifer E. Magnussen, Lawrence R. Beerkircher, George Hinteregger, Dennis W. Lee, Joseph E. Serafy, Eric D. Prince
Marine & Environmental Sciences Faculty Articles

PDF

Global Estimates of Shark Catches Using Trade Records From Commercial Markets, Shelley C. Clarke, Murdoch K. McAllister, E. J. Milner-Gulland, G. P. Kirkwood, Catherine G. J. Michielsens, David J. Agnew, Ellen K. Pikitch, Hideki Nakano, Mahmood S. Shivji
Biology Faculty Articles

Identification of Shark Species Composition and Proportion in the Hong Kong Shark Fin Market Based on Molecular Genetics and Trade Records, Shelley C. Clarke, Jennifer E. Magnussen, Debra Abercrombie, Murdoch K. McAllister, Mahmood S. Shivji
Marine & Environmental Sciences Faculty Articles

2005

Genetic Profiling Reveals Illegal International Trade in Fins of the Great White Shark, Carcharodon carcharias, Mahmood S. Shivji, Demian D. Chapman, Ellen K. Pikitch, Paul W. Raymond
Biology Faculty Articles

Global-Scale Genetic Identification of Hammerhead Sharks: Application to Assessment of the International Fin Trade and Law Enforcement, Debra Abercrombie, Shelley C. Clarke, Mahmood S. Shivji
Marine & Environmental Sciences Faculty Articles

2004

Predominance of Genetic Monogamy by Females in a Hammerhead Shark, Sphyrna tiburo: Implications for Shark Conservation, Demian D. Chapman, Paulo A. Prodohl, James Gelsleichter, Charles A. Manire, Mahmood S. Shivji
Marine & Environmental Sciences Faculty Articles

2003

A Streamlined, Bi-Organelle, Multiplex PCR Approach to Species Identification: Application to Global Conservation and Trade Monitoring of the Great White Shark, Carcharodon carcharias, Demian D. Chapman, Debra Abercrombie, Christophe J. Douady, Ellen K. Pikitch, Michael Stanhope, Mahmood S. Shivji
Marine & Environmental Sciences Faculty Articles

Molecular Phylogenetic Evidence Refuting the Hypothesis of Batoidea (Rays and Skates) as Derived Sharks, C. J. Douady, Mine Dosay, Mahmood S. Shivji, Michael Stanhope
Biology Faculty Articles

2002

Genetic Identification of Pelagic Shark Body Parts for Conservation and Trade Monitoring, Mahmood S. Shivji, Shelley C. Clarke, Melissa Pank, Lisa Natanson, Nancy Kohler, GlaxoSmithKline Pharmaceuticals
Biology Faculty Articles

2001

Rapid and Simultaneous Identification of Body Parts from the Morphologically Similar Sharks Carcharhinus obscurus and Carcharhinus plumbeus (Carcharhinidae) Using Multiplex PCR, Melissa Pank, Michael Stanhope, Lisa Natanson, Nancy Kohler, Mahmood S. Shivji
Marine & Environmental Sciences Faculty Articles

1996

Mammalian Evolution and the Interphotoreceptor Retinoid Binding Protein (IRBP) Gene: Convincing Evidence for Several Superordinal Clades, Michael Stanhope, Marta R. Smith, Victor G. Waddell, Calvin A. Porter, Mahmood S. Shivji, Morris Goodman
Biology Faculty Articles

Phylogenetic Evidence from the IRBP Gene for the Paraphyly of Toothed Whales, with Mixed Support for Cetacea as a Suborder of Artiodactyla, Marta R. Smith, Mahmood S. Shivji, Victor G. Waddell, Michael Stanhope
Marine & Environmental Sciences Faculty Articles