Why and How to Sequence All Eukaryotic Genomes on the Planet, Jose V. Lopez
Jose Lopez

Why and How to Sequence All Eukaryotic Genomes on the Planet, Jose V. Lopez, EarthBioGenome
HCAS Ocean Science Research Symposium

Closing Statements, Jose V. Lopez
HCAS Ocean Science Research Symposium

Using Probabilities of Enterococci Exceedance and Logistic Regression to Evaluate Long Term Weekly Beach Monitoring Data, Diana Ixchel Aranda, Jose V. Lopez, Helena M. Solo-Gabriele, Jay Fleisher
Jose Lopez

Editorial: Deep Pelagic Ecosystem Dynamics in a Highly Impacted Water Column: The Gulf of Mexico After Deepwater Horizon, Tracey Sutton, Kevin M. Boswell, Heather Bracken-Grissom, Jose V. Lopez, Michael Vecchione, Marsh Youngbluth
Jose Lopez

Editorial: Deep Pelagic Ecosystem Dynamics in a Highly Impacted Water Column: The Gulf of Mexico After Deepwater Horizon, Tracey Sutton, Kevin M. Boswell, Heather Bracken-Grissom, Jose V. Lopez, Michael Vecchione, Marsh Youngbluth
Marine & Environmental Sciences Faculty Articles

Editorial: Deep Pelagic Ecosystem Dynamics in a Highly Impacted Water Column: The Gulf of Mexico After Deepwater Horizon, Tracey Sutton, Kevin M. Boswell, Heather Bracken-Grissom, Jose V. Lopez, Michael Vecchione, Marsh Youngbluth
Tracey Sutton

Metagenomic characterization of the cyanobacterial harmful algal blooms in Lake Okeechobee, Lauren E. Krausfeldt, Barry Rosen, Viviana Mazzei, Eric Fortman, Elizaveta Shmakova, Jose V. Lopez
HCAS Ocean Science Research Symposium

Metagenomic characterization of the cyanobacterial harmful algal blooms in Lake Okeechobee, Lauren E. Krausfeldt, Barry Rosen, Viviana Mazzei, Eric Fortman, Elizaveta Shmakova, Jose V. Lopez
Jose Lopez

Characterizing Marine Biodiversity through the Global Invertebrate Genomics Alliance (GIGA), Jose V. Lopez
Jose Lopez

Characterizing Marine Biodiversity through the Global Invertebrate Genomics Alliance (GIGA), Jose V. Lopez
Biology Faculty Proceedings, Presentations, Speeches, Lectures

Bleaching Events Regulate Shifts from Corals to Excavating Sponges in Algae-Dominated Reefs, Andia Chaves Fonnegra, Bernhard Riegl, Sven Zea, Jose V. Lopez, Tyler B. Smith, Marilyn Brandt, David S. Gilliam
David Gilliam

Bleaching Events Regulate Shifts from Corals to Excavating Sponges in Algae-Dominated Reefs, Andia Chaves Fonnegra, Bernhard Riegl, Sven Zea, Jose V. Lopez, Tyler B. Smith, Marilyn Brandt, David S. Gilliam
Bernhard Riegl

Microbiomes and Dynamic Genomes of Anglerfish Bacterial Symbionts in the Gulf of Mexico, Jose V. Lopez, Lindsay Freed, Cole Easson, Dana Feder, Tracey Sutton, Dante Fenolio, Tory Hendry
Tracey Sutton

Deep-Pelagic Research in the Gulf of Mexico: The DEEPEND Consortium, Tracey Sutton, April Cook, Kevin M. Boswell, Heather D. Bracken-Grissom, Sergio DeRada, David English, Ron Eytan, C. Hu, Matthew Johnston, Heather Judkins, Chad Lembke, Jose V. Lopez, J. Moore, M. Nizinski, Brad Penta, Isabel C. Romero, Jay R. Rooker, Mahmood S. Shivji, Michael Vecchione, D. Wells, Marsh Youngbluth, D. Fenolio, Tamara Frank
Matthew Johnston

Microbiomes and Dynamic Genomes of Anglerfish Bacterial Symbionts in the Gulf of Mexico, Jose V. Lopez, Lindsay Freed, Cole Easson, Dana Feder, Tracey Sutton, Dante Fenolio, Tory Hendry
Jose Lopez

Bleaching Events Regulate Shifts from Corals to Excavating Sponges in Algae-Dominated Reefs, Andia Chaves Fonnegra, Bernhard Riegl, Sven Zea, Jose V. Lopez, Tyler B. Smith, Marilyn Brandt, David S. Gilliam
Jose Lopez

Microbiomes and Dynamic Genomes of Anglerfish Bacterial Symbionts in the Gulf of Mexico, Jose V. Lopez, Lindsay Freed, Cole Easson, Dana Feder, Tracey Sutton, Dante Fenolio, Tory Hendry
HCAS Ocean Science Research Symposium

Bleaching Events Regulate Shifts from Corals to Excavating Sponges in Algae-Dominated Reefs, Andia Chaves Fonnegra, Bernhard Riegl, Sven Zea, Jose V. Lopez, Tyler B. Smith, Marilyn Brandt, David S. Gilliam
Marine & Environmental Sciences Faculty Articles

Deep-Pelagic Research in the Gulf of Mexico: The DEEPEND Consortium, Tracey Sutton, April Cook, Kevin M. Boswell, Heather D. Bracken-Grissom, Sergio DeRada, David English, Ron Eytan, C. Hu, Matthew Johnston, Heather Judkins, Chad Lembke, Jose V. Lopez, J. Moore, M. Nizinski, Brad Penta, Isabel C. Romero, Jay R. Rooker, Mahmood S. Shivji, Michael Vecchione, D. Wells, Marsh Youngbluth, D. Fenolio, Tamara Frank
Tamara Frank

Anglerfish Bacterial Symbionts and Seawater from the Northern Gulf of Mexico, L. Freed, D. Fenolio, Cole Easson, T. Hendry, Tracey Sutton, Jose V. Lopez
Jose Lopez

Deep-Pelagic Research in the Gulf of Mexico: The DEEPEND Consortium, Tracey Sutton, April Cook, Kevin M. Boswell, Heather D. Bracken-Grissom, Sergio DeRada, David English, Ron Eytan, C. Hu, Matthew Johnston, Heather Judkins, Chad Lembke, Jose V. Lopez, J. Moore, M. Nizinski, Brad Penta, Isabel C. Romero, Jay R. Rooker, Mahmood S. Shivji, Michael Vecchione, D. Wells, Marsh Youngbluth, D. Fenolio, Tamara Frank
Jose Lopez

Deep-Pelagic Research in the Gulf of Mexico: The DEEPEND Consortium, Tracey Sutton, April Cook, Kevin M. Boswell, Heather D. Bracken-Grissom, Sergio DeRada, David English, Ron Eytan, C. Hu, Matthew Johnston, Heather Judkins, Chad Lembke, Jose V. Lopez, J. Moore, M. Nizinski, Brad Penta, Isabel C. Romero, Jay R. Rooker, Mahmood S. Shivji, Michael Vecchione, D. Wells, Marsh Youngbluth, D. Fenolio, Tamara Frank
Mahmood Shivji

Anglerfish Bacterial Symbionts and Seawater from the Northern Gulf of Mexico, L. Freed, D. Fenolio, Cole Easson, T. Hendry, Tracey Sutton, Jose V. Lopez
Tracey Sutton

Deep-Pelagic Research in the Gulf of Mexico: The DEEPEND Consortium, Tracey Sutton, April Cook, Kevin M. Boswell, Heather D. Bracken-Grissom, Sergio DeRada, David English, Ron Eytan, C. Hu, Matthew Johnston, Heather Judkins, Chad Lembke, Jose V. Lopez, J. Moore, M. Nizinski, Brad Penta, Isabel C. Romero, Jay R. Rooker, Mahmood S. Shivji, Michael Vecchione, D. Wells, Marsh Youngbluth, D. Fenolio, Tamara Frank
Tracey Sutton

DEEPEND: Deep-Pelagic Nekton Dynamics of the Gulf of Mexico, Tracey Sutton, April B. Cook, Kevin M. Boswell, Heather D. Bracken-Grissom, David Wells, David English, Ron Eytan, Dante Fenolio, Tamara M. Frank, Chad Lembke, Jose V. Lopez, Jon Moore, Martha Nizinski, Isabel C. Romero, Jay R. Rooker, Mahmood S. Shivji, Michael Vecchione, Brad Penta, Marsh Youngbluth
Jose Lopez

DEEPEND: Deep-Pelagic Nekton Dynamics of the Gulf of Mexico, Tracey Sutton, April B. Cook, Kevin M. Boswell, Heather D. Bracken-Grissom, David Wells, David English, Ron Eytan, Dante Fenolio, Tamara M. Frank, Chad Lembke, Jose V. Lopez, Jon Moore, Martha Nizinski, Isabel C. Romero, Jay R. Rooker, Mahmood S. Shivji, Michael Vecchione, Brad Penta, Marsh Youngbluth
Jose Lopez

Diversity, Structure and Convergent Evolution of the Global Sponge Microbiome, Torsten Thomas, Lucas Moitinho-Silva, Miguel Lurgi, Johannes R. Bjork, Cole Easson, Carmen Astudillo-Garcia, Julie B. Olson, Patrick M. Erwin, Susanna Lopez-Legentil, Heidi Luter, Andia Chaves Fonnegra, Rodrigo Costa, Peter J. Schupp, Laura Steindler, Dirk Erpenbeck, Jack Gilbert, Rob Knight, Gail Ackermann, Jose V. Lopez, Michael W. Taylor, Robert W. Thacker, Jose M. Montoya, Ute Hentschel, Nicole S. Webster
Jose Lopez

Understanding Deep-Pelagic Ecosystem Dynamics: A New Research Initiative in the Gulf of Mexico (DEEPEND), Tracey Sutton, K. M. Boswell, Heather D. Bracken-Grissom, April B. Cook, S. DeRada, D. English, R. Eytan, D. Fenolio, Tamara M. Frank, C. Hu, Matthew Johnston, H. Judkins, C. Lembke, Jose V. Lopez, J. A. Moore, M. Nizinski, B. Penta, I. C. Romero, J. R. Rooker, Mahmood S. Shivji, R. J. D. Wells, Michael Vecchione, M. Youngbluth
Jose Lopez

Deep-Pelagic Research in the Gulf of Mexico: The DEEPEND Consortium, Tracey Sutton, April Cook, Kevin M. Boswell, Heather D. Bracken-Grissom, Sergio DeRada, David English, Ron Eytan, C. Hu, Matthew Johnston, Heather Judkins, Chad Lembke, Jose V. Lopez, J. Moore, M. Nizinski, Brad Penta, Isabel C. Romero, Jay R. Rooker, Mahmood S. Shivji, Michael Vecchione, D. Wells, Marsh Youngbluth, D. Fenolio, Tamara Frank
Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Anglerfish Bacterial Symbionts and Seawater from the Northern Gulf of Mexico, L. Freed, D. Fenolio, Cole Easson, T. Hendry, Tracey Sutton, Jose V. Lopez
Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

DEEPEND: Deep-Pelagic Nekton Dynamics of the Gulf of Mexico, Tracey Sutton, April B. Cook, Kevin M. Boswell, Heather D. Bracken-Grissom, David Wells, David English, Ron Eytan, Dante Fenolio, Tamara M. Frank, Chad Lembke, Jose V. Lopez, Jon Moore, Martha Nizinski, Isabel C. Romero, Jay R. Rooker, Mahmood S. Shivji, Michael Vecchione, Brad Penta, Marsh Youngbluth
Mahmood Shivji

DEEPEND: Deep-Pelagic Nekton Dynamics of the Gulf of Mexico, Tracey Sutton, April B. Cook, Kevin M. Boswell, Heather D. Bracken-Grissom, David Wells, David English, Ron Eytan, Dante Fenolio, Tamara M. Frank, Chad Lembke, Jose V. Lopez, Jon Moore, Martha Nizinski, Isabel C. Romero, Jay R. Rooker, Mahmood S. Shivji, Michael Vecchione, Brad Penta, Marsh Youngbluth
Mahmood Shivji

Understanding Deep-Pelagic Ecosystem Dynamics: A New Research Initiative in the Gulf of Mexico (DEEPEND), Tracey Sutton, K. M. Boswell, Heather D. Bracken-Grissom, April B. Cook, S. DeRada, D. English, R. Eytan, D. Fenolio, Tamara M. Frank, C. Hu, Matthew Johnston, H. Judkins, C. Lembke, Jose V. Lopez, J. A. Moore, M. Nizinski, B. Penta, I. C. Romero, J. R. Rooker, Mahmood S. Shivji, R. J. D. Wells, Michael Vecchione, M. Youngbluth
Mahmood Shivji

Scleractinian Coral Recruitment to Reefs Physically Damaged by Ship Groundings, E. T. Rubin, Alison L. Moulding, Jose V. Lopez, David S. Gilliam, V. N. Kosmynin, Richard E. Dodge
Richard Dodge

Pyrosequencing of Bacterial Symbionts within Axinella corrugata Sponges: Diversity and Seasonal Variability, James R. White, Jignasa Patel, Andrea Ottesen, Gabriela Arce, Patricia Blackwelder, Jose V. Lopez
Patricia Blackwelder

Scleractinian Coral Recruitment to Reefs Physically Damaged by Ship Groundings, E. T. Rubin, Alison L. Moulding, Jose V. Lopez, David S. Gilliam, V. N. Kosmynin, Richard E. Dodge
David Gilliam

Co-Cultures of Pseudomonas aeruginosa and Roseobacter denitrificans Reveal Shifts in Gene Expression Levels Compared to Solo Cultures, Crystal A. Conway, Nwadiuto Esiobu, Jose V. Lopez
Jose Lopez

Comparison of Bacterial Diversity within the Coral Reef Sponge, Axinella corrugata, and the Encrusting Coral Erythropodium caribaeorum, Jose V. Lopez, L. K. Ranzer, A. Ledger, B. Schoch, A. Duckworth, P. J. McCarthy, R. G. Kerr
Jose Lopez

Andros Island Flora and Fauna in the New Millennium, Jose V. Lopez, Cheryl L. Peterson, Felix Morales, Luther Brown
Jose Lopez

Dynamics of Marine Bacterial Community Diversity of the Coastal Waters of the Reefs, Inlets, and Wastewater Outfalls of Southeast Florida, Alexandra Mandina Campbell, Jay Fleisher, Christopher D. Sinigalliano, James R. White, Jose V. Lopez
Jose Lopez

Discrimination of Species in the Montastrea annularis Complex using Multiple Genetic Loci, Jose V. Lopez, Nancy Knowlton
Jose Lopez

Diverse Bacterial PKS Sequences Derived from Okadaic Acid-Producing Dinoflagellates, Roberto Perez, Li Liu, Jose V. Lopez, Tianying An, Kathleen S. Rein
Jose Lopez

Metabolites from the Marine-Derived Fungus Chromocleista sp. Isolated from a Deep-Water Sediment Sample Collected in the Gulf of Mexico, Young Chul Park, Sarath P. Gunasekera, Jose V. Lopez, Peter J. McCarthy, Amy E. Wright
Jose Lopez

Molecular Techniques Reveal Wide Phyletic Diversity of Heterotrophic Microbes Associated with Discodermia spp. (Porifera: Demospongiae), Jose V. Lopez, Peter J. McCarthy, Kathleen E. Janda, Robin Willoughby, Shirley A. Pomponi
Jose Lopez

Molecular Evolution of Numt, a Recent Transfer and Tandem Amplification of Mitochondrial DNA into the Nuclear Genome of the Domestic Cat (Felis catus), Jose V. Lopez
Jose Lopez

Taking a Cat Map: Genome Analysis by Supercomputer, Jose V. Lopez
Jose Lopez

Some Preservation Techniques for (Deep Water) Coral Samples for Subsequent Molecular Studies: A Special Supplement from Harbor Branch Oceanographic Institute, Jose V. Lopez
Jose Lopez

Pyrosequencing of Bacterial Symbionts within Axinella corrugata Sponges: Diversity and Seasonal Variability, James R. White, Jignasa Patel, Andrea Ottesen, Gabriela Arce, Patricia Blackwelder, Jose V. Lopez
Jose Lopez

Reconstruction of Family-Level Phylogenetic Relationships within Demospongiae (Porifera) Using Nuclear Encoded Housekeeping Genes, Malcolm S. Hill, April L. Hill, Jose V. Lopez, Kevin J. Peterson, Shirley Pomponi, Maria C. Diaz, Robert W. Thacker, Maja Adamska, Nicole Boury-Esnault, Paco Cárdenas, Andia Chaves-Fonnegra, Elizabeth Danka, Bre-Onna De Laine, Dawn Formica, Eduardo Hajdu, Gisele Lobo-Hajdu, Sarah Klontz, Christine C. Morrow, Jignasa Patel, Bernard Picton, Davide Pisani, Deborah Pohlmann, Niamh E. Redmond, John Reed, Stacy Richey, Ana Riesgo, Ewelina Rubin, Zach Russell, Klaus Rützler, Erik A. Sperling, Michael di Stefano, James E. Tarver, Allen G. Collins
Jose Lopez

Suppression Subtractive Hybridization PCR Isolation of cDNAs from a Caribbean Soft Coral, Jose V. Lopez, Angela Ledger, Lory Z. Santiago-Vázquez, Mihai Pop, Dan D. Sommer, Llanie K. Ranzer, Robert A. Feldman, Russell G. Kerr
Jose Lopez

Scleractinian Coral Recruitment to Reefs Physically Damaged by Ship Groundings, E. T. Rubin, Alison L. Moulding, Jose V. Lopez, David S. Gilliam, V. N. Kosmynin, Richard E. Dodge
Jose Lopez

Andros Island Flora and Fauna in the New Millennium, Jose V. Lopez, Cheryl L. Peterson, Felix Morales, Luther Brown
Jose Lopez

Comparison of Bacterial Diversity within the Coral Reef Sponge, Axinella corrugata, and the Encrusting Coral Erythropodium caribaeorum, Jose V. Lopez, L. K. Ranzer, A. Ledger, B. Schoch, A. Duckworth, P. J. McCarthy, R. G. Kerr
Jose Lopez

Diverse Bacterial PKS Sequences Derived from Okadaic Acid-Producing Dinoflagellates, Roberto Perez, Li Liu, Jose V. Lopez, Tianying An, Kathleen S. Rein
Jose Lopez

Co-Cultures of Pseudomonas aeruginosa and Roseobacter denitrificans Reveal Shifts in Gene Expression Levels Compared to Solo Cultures, Crystal A. Conway, Nwadiuto Esiobu, Jose V. Lopez
Jose Lopez

Discrimination of Species in the Montastrea annularis Complex using Multiple Genetic Loci, Jose V. Lopez, Nancy Knowlton
Jose Lopez

Dynamics of Marine Bacterial Community Diversity of the Coastal Waters of the Reefs, Inlets, and Wastewater Outfalls of Southeast Florida, Alexandra Mandina Campbell, Jay Fleisher, Christopher D. Sinigalliano, James R. White, Jose V. Lopez
Jose Lopez

Florida Reef Sponges Harbor Coral Disease-Associated Microbes, Karita Negandhi, Patricia Blackwelder, Alexander V. Ereskovsky, Jose V. Lopez
Jose Lopez

Metabolites from the Marine-Derived Fungus Chromocleista sp. Isolated from a Deep-Water Sediment Sample Collected in the Gulf of Mexico, Young Chul Park, Sarath P. Gunasekera, Jose V. Lopez, Peter J. McCarthy, Amy E. Wright
Jose Lopez

Molecular Evolution of Numt, a Recent Transfer and Tandem Amplification of Mitochondrial DNA into the Nuclear Genome of the Domestic Cat (Felis catus), Jose V. Lopez
Jose Lopez

In Vitro Production of Marine-Derived Compounds, Shirley A. Pomponi, Robin Willoughby, Amy E. Wright, Claudia Pecorella, Susan H. Sennett, Jose V. Lopez, Gail Samples
Jose Lopez

Population Structure and Dispersal of the Coral-Excavating Sponge Cliona delitrix, Andia Chaves Fonnegra, Kevin A. Feldheim, Jesse Secord, Jose V. Lopez
Jose Lopez

Molecular Techniques Reveal Wide Phyletic Diversity of Heterotrophic Microbes Associated with Discodermia spp. (Porifera: Demospongiae), Jose V. Lopez, Peter J. McCarthy, Kathleen E. Janda, Robin Willoughby, Shirley A. Pomponi
Jose Lopez

Some Preservation Techniques for (Deep Water) Coral Samples for Subsequent Molecular Studies: A Special Supplement from Harbor Branch Oceanographic Institute, Jose V. Lopez
Jose Lopez

Reconstruction of Family-Level Phylogenetic Relationships within Demospongiae (Porifera) Using Nuclear Encoded Housekeeping Genes, Malcolm S. Hill, April L. Hill, Jose V. Lopez, Kevin J. Peterson, Shirley Pomponi, Maria C. Diaz, Robert W. Thacker, Maja Adamska, Nicole Boury-Esnault, Paco Cárdenas, Andia Chaves-Fonnegra, Elizabeth Danka, Bre-Onna De Laine, Dawn Formica, Eduardo Hajdu, Gisele Lobo-Hajdu, Sarah Klontz, Christine C. Morrow, Jignasa Patel, Bernard Picton, Davide Pisani, Deborah Pohlmann, Niamh E. Redmond, John Reed, Stacy Richey, Ana Riesgo, Ewelina Rubin, Zach Russell, Klaus Rützler, Erik A. Sperling, Michael di Stefano, James E. Tarver, Allen G. Collins
Jose Lopez

Scleractinian Coral Recruitment to Reefs Physically Damaged by Ship Groundings, E. T. Rubin, Alison L. Moulding, Jose V. Lopez, David S. Gilliam, V. N. Kosmynin, Richard E. Dodge
Jose Lopez

Pyrosequencing of Bacterial Symbionts within Axinella corrugata Sponges: Diversity and Seasonal Variability, James R. White, Jignasa Patel, Andrea Ottesen, Gabriela Arce, Patricia Blackwelder, Jose V. Lopez
Jose Lopez

Taking a Cat Map: Genome Analysis by Supercomputer, Jose V. Lopez
Jose Lopez

Suppression Subtractive Hybridization PCR Isolation of cDNAs from a Caribbean Soft Coral, Jose V. Lopez, Angela Ledger, Lory Z. Santiago-Vázquez, Mihai Pop, Dan D. Sommer, Llanie K. Ranzer, Robert A. Feldman, Russell G. Kerr
Jose Lopez

Andros Island Flora and Fauna in the New Millennium, Jose V. Lopez, Cheryl L. Peterson, Felix Morales, Luther Brown
Jose Lopez

Comparison of Bacterial Diversity within the Coral Reef Sponge, Axinella corrugata, and the Encrusting Coral Erythropodium caribaeorum, Jose V. Lopez, L. K. Ranzer, A. Ledger, B. Schoch, A. Duckworth, P. J. McCarthy, R. G. Kerr
Jose Lopez

Co-Cultures of Pseudomonas aeruginosa and Roseobacter denitrificans Reveal Shifts in Gene Expression Levels Compared to Solo Cultures, Crystal A. Conway, Nwadiuto Esiobu, Jose V. Lopez
Jose Lopez

Diverse Bacterial PKS Sequences Derived from Okadaic Acid-Producing Dinoflagellates, Roberto Perez, Li Liu, Jose V. Lopez, Tianying An, Kathleen S. Rein
Jose Lopez

Discrimination of Species in the Montastrea annularis Complex using Multiple Genetic Loci, Jose V. Lopez, Nancy Knowlton
Jose Lopez

Dynamics of Marine Bacterial Community Diversity of the Coastal Waters of the Reefs, Inlets, and Wastewater Outfalls of Southeast Florida, Alexandra Mandina Campbell, Jay Fleisher, Christopher D. Sinigalliano, James R. White, Jose V. Lopez
Jose Lopez

Metabolites from the Marine-Derived Fungus Chromocleista sp. Isolated from a Deep-Water Sediment Sample Collected in the Gulf of Mexico, Young Chul Park, Sarath P. Gunasekera, Jose V. Lopez, Peter J. McCarthy, Amy E. Wright
Jose Lopez

Molecular Techniques Reveal Wide Phyletic Diversity of Heterotrophic Microbes Associated with Discodermia spp. (Porifera: Demospongiae), Jose V. Lopez, Peter J. McCarthy, Kathleen E. Janda, Robin Willoughby, Shirley A. Pomponi
Jose Lopez

Molecular Evolution of Numt, a Recent Transfer and Tandem Amplification of Mitochondrial DNA into the Nuclear Genome of the Domestic Cat (Felis catus), Jose V. Lopez
Jose Lopez

Suppression Subtractive Hybridization PCR Isolation of cDNAs from a Caribbean Soft Coral, Jose V. Lopez, Angela Ledger, Lory Z. Santiago-Vázquez, Mihai Pop, Dan D. Sommer, Llanie K. Ranzer, Robert A. Feldman, Russell G. Kerr
Jose Lopez

Scleractinian Coral Recruitment to Reefs Physically Damaged by Ship Groundings, E. T. Rubin, Alison L. Moulding, Jose V. Lopez, David S. Gilliam, V. N. Kosmynin, Richard E. Dodge
Jose Lopez

Pyrosequencing of Bacterial Symbionts within Axinella corrugata Sponges: Diversity and Seasonal Variability, James R. White, Jignasa Patel, Andrea Ottesen, Gabriela Arce, Patricia Blackwelder, Jose V. Lopez
Jose Lopez

Some Preservation Techniques for (Deep Water) Coral Samples for Subsequent Molecular Studies: A Special Supplement from Harbor Branch Oceanographic Institute, Jose V. Lopez
Jose Lopez

Reconstruction of Family-Level Phylogenetic Relationships within Demospongiae (Porifera) Using Nuclear Encoded Housekeeping Genes, Malcolm S. Hill, April L. Hill, Jose V. Lopez, Kevin J. Peterson, Shirley Pomponi, Maria C. Diaz, Robert W. Thacker, Maja Adamska, Nicole Boury-Esnault, Paco Cárdenas, Andia Chaves-Fonnegra, Elizabeth Danka, Bre-Onna De Laine, Dawn Formica, Eduardo Hajdu, Gisele Lobo-Hajdu, Sarah Klontz, Christine C. Morrow, Jignasa Patel, Bernard Picton, Davide Pisani, Deborah Pohlmann, Niamh E. Redmond, John Reed, Stacy Richey, Ana Riesgo, Ewelina Rubin, Zach Russell, Klaus Rützler, Erik A. Sperling, Michael di Stefano, James E. Tarver, Allen G. Collins
Jose Lopez

Taking a Cat Map: Genome Analysis by Supercomputer, Jose V. Lopez
Jose Lopez

Diverse Bacterial PKS Sequences Derived from Okadaic Acid-Producing Dinoflagellates, Roberto Perez, Li Liu, Jose V. Lopez, Tianying An, Kathleen S. Rein
Jose Lopez

Dynamics of Marine Bacterial Community Diversity of the Coastal Waters of the Reefs, Inlets, and Wastewater Outfalls of Southeast Florida, Alexandra Mandina Campbell, Jay Fleisher, Christopher D. Sinigalliano, James R. White, Jose V. Lopez
Jose Lopez

Discrimination of Species in the Montastrea annularis Complex using Multiple Genetic Loci, Jose V. Lopez, Nancy Knowlton
Jose Lopez

Co-Cultures of Pseudomonas aeruginosa and Roseobacter denitrificans Reveal Shifts in Gene Expression Levels Compared to Solo Cultures, Crystal A. Conway, Nwadiuto Esiobu, Jose V. Lopez
Jose Lopez

Andros Island Flora and Fauna in the New Millennium, Jose V. Lopez, Cheryl L. Peterson, Felix Morales, Luther Brown
Jose Lopez

Comparison of Bacterial Diversity within the Coral Reef Sponge, Axinella corrugata, and the Encrusting Coral Erythropodium caribaeorum, Jose V. Lopez, L. K. Ranzer, A. Ledger, B. Schoch, A. Duckworth, P. J. McCarthy, R. G. Kerr
Jose Lopez

Molecular Techniques Reveal Wide Phyletic Diversity of Heterotrophic Microbes Associated with Discodermia spp. (Porifera: Demospongiae), Jose V. Lopez, Peter J. McCarthy, Kathleen E. Janda, Robin Willoughby, Shirley A. Pomponi
Jose Lopez

Metabolites from the Marine-Derived Fungus Chromocleista sp. Isolated from a Deep-Water Sediment Sample Collected in the Gulf of Mexico, Young Chul Park, Sarath P. Gunasekera, Jose V. Lopez, Peter J. McCarthy, Amy E. Wright
Jose Lopez

Molecular Evolution of Numt, a Recent Transfer and Tandem Amplification of Mitochondrial DNA into the Nuclear Genome of the Domestic Cat (Felis catus), Jose V. Lopez
Jose Lopez

Pyrosequencing of Bacterial Symbionts within Axinella corrugata Sponges: Diversity and Seasonal Variability, James R. White, Jignasa Patel, Andrea Ottesen, Gabriela Arce, Patricia Blackwelder, Jose V. Lopez
Jose Lopez

Reconstruction of Family-Level Phylogenetic Relationships within Demospongiae (Porifera) Using Nuclear Encoded Housekeeping Genes, Malcolm S. Hill, April L. Hill, Jose V. Lopez, Kevin J. Peterson, Shirley Pomponi, Maria C. Diaz, Robert W. Thacker, Maja Adamska, Nicole Boury-Esnault, Paco Cárdenas, Andia Chaves-Fonnegra, Elizabeth Danka, Bre-Onna De Laine, Dawn Formica, Eduardo Hajdu, Gisele Lobo-Hajdu, Sarah Klontz, Christine C. Morrow, Jignasa Patel, Bernard Picton, Davide Pisani, Deborah Pohlmann, Niamh E. Redmond, John Reed, Stacy Richey, Ana Riesgo, Ewelina Rubin, Zach Russell, Klaus Rützler, Erik A. Sperling, Michael di Stefano, James E. Tarver, Allen G. Collins
Jose Lopez

Suppression Subtractive Hybridization PCR Isolation of cDNAs from a Caribbean Soft Coral, Jose V. Lopez, Angela Ledger, Lory Z. Santiago-Vázquez, Mihai Pop, Dan D. Sommer, Llanie K. Ranzer, Robert A. Feldman, Russell G. Kerr
Jose Lopez

Scleractinian Coral Recruitment to Reefs Physically Damaged by Ship Groundings, E. T. Rubin, Alison L. Moulding, Jose V. Lopez, David S. Gilliam, V. N. Kosmynin, Richard E. Dodge
Jose Lopez

Taking a Cat Map: Genome Analysis by Supercomputer, Jose V. Lopez
Jose Lopez

Population Structure and Dispersal of the Coral-Excavating Sponge Cliona delitrix, Andia Chaves Fonnegra, Kevin A. Feldheim, Jesse Secord, Jose V. Lopez
Jose Lopez

Some Preservation Techniques for (Deep Water) Coral Samples for Subsequent Molecular Studies: A Special Supplement from Harbor Branch Oceanographic Institute, Jose V. Lopez
Jose Lopez

Discrimination of Species in the Montastrea annularis Complex using Multiple Genetic Loci, Jose V. Lopez, Nancy Knowlton
Jose Lopez

Dynamics of Marine Bacterial Community Diversity of the Coastal Waters of the Reefs, Inlets, and Wastewater Outfalls of Southeast Florida, Alexandra Mandina Campbell, Jay Fleisher, Christopher D. Sinigalliano, James R. White, Jose V. Lopez
Jose Lopez

Andros Island Flora and Fauna in the New Millennium, Jose V. Lopez, Cheryl L. Peterson, Felix Morales, Luther Brown
Jose Lopez

Comparison of Bacterial Diversity within the Coral Reef Sponge, Axinella corrugata, and the Encrusting Coral Erythropodium caribaeorum, Jose V. Lopez, L. K. Ranzer, A. Ledger, B. Schoch, A. Duckworth, P. J. McCarthy, R. G. Kerr
Jose Lopez

Co-Cultures of Pseudomonas aeruginosa and Roseobacter denitrificans Reveal Shifts in Gene Expression Levels Compared to Solo Cultures, Crystal A. Conway, Nwadiuto Esiobu, Jose V. Lopez
Jose Lopez

Diverse Bacterial PKS Sequences Derived from Okadaic Acid-Producing Dinoflagellates, Roberto Perez, Li Liu, Jose V. Lopez, Tianying An, Kathleen S. Rein
Jose Lopez

Scleractinian Coral Recruitment to Reefs Physically Damaged by Ship Groundings, E. T. Rubin, Alison L. Moulding, Jose V. Lopez, David S. Gilliam, V. N. Kosmynin, Richard E. Dodge
Jose Lopez

Metabolites from the Marine-Derived Fungus Chromocleista sp. Isolated from a Deep-Water Sediment Sample Collected in the Gulf of Mexico, Young Chul Park, Sarath P. Gunasekera, Jose V. Lopez, Peter J. McCarthy, Amy E. Wright
Jose Lopez

Molecular Evolution of Numt, a Recent Transfer and Tandem Amplification of Mitochondrial DNA into the Nuclear Genome of the Domestic Cat (Felis catus), Jose V. Lopez
Jose Lopez

Reconstruction of Family-Level Phylogenetic Relationships within Demospongiae (Porifera) Using Nuclear Encoded Housekeeping Genes, Malcolm S. Hill, April L. Hill, Jose V. Lopez, Kevin J. Peterson, Shirley Pomponi, Maria C. Diaz, Robert W. Thacker, Maja Adamska, Nicole Boury-Esnault, Paco Cárdenas, Andia Chaves-Fonnegra, Elizabeth Danka, Bre-Onna De Laine, Dawn Formica, Eduardo Hajdu, Gisele Lobo-Hajdu, Sarah Klontz, Christine C. Morrow, Jignasa Patel, Bernard Picton, Davide Pisani, Deborah Pohlmann, Niamh E. Redmond, John Reed, Stacy Richey, Ana Riesgo, Ewelina Rubin, Zach Russell, Klaus Rützler, Erik A. Sperling, Michael di Stefano, James E. Tarver, Allen G. Collins
Jose Lopez

Molecular Techniques Reveal Wide Phyletic Diversity of Heterotrophic Microbes Associated with Discodermia spp. (Porifera: Demospongiae), Jose V. Lopez, Peter J. McCarthy, Kathleen E. Janda, Robin Willoughby, Shirley A. Pomponi
Jose Lopez

Pyrosequencing of Bacterial Symbionts within Axinella corrugata Sponges: Diversity and Seasonal Variability, James R. White, Jignasa Patel, Andrea Ottesen, Gabriela Arce, Patricia Blackwelder, Jose V. Lopez
Jose Lopez

Diversity, Structure and Convergent Evolution of the Global Sponge Microbiome, Torsten Thomas, Lucas Moitinho-Silva, Miguel Lurgi, Johannes R. Bjork, Cole Easson, Carmen Astudillo-Garcia, Julie B. Olson, Patrick M. Erwin, Susanna Lopez-Legentil, Heidi Luter, Andia Chaves Fonnegra, Rodrigo Costa, Peter J. Schupp, Laura Steindler, Dirk Erpenbeck, Jack Gilbert, Rob Knight, Gail Ackermann, Jose V. Lopez, Michael W. Taylor, Robert W. Thacker, Jose M. Montoya, Ute Hentschel, Nicole S. Webster
Marine & Environmental Sciences Faculty Articles

Using Probabilities of Enterococci Exceedance and Logistic Regression to Evaluate Long Term Weekly Beach Monitoring Data, Diana Ixchel Aranda, Jose V. Lopez, Helena M. Solo-Gabriele, Jay Fleisher
Marine & Environmental Sciences Faculty Articles

Understanding Deep-Pelagic Ecosystem Dynamics: A New Research Initiative in the Gulf of Mexico (DEEPEND), Tracey Sutton, K. M. Boswell, Heather D. Bracken-Grissom, April B. Cook, S. DeRada, D. English, R. Eytan, D. Fenolio, Tamara M. Frank, C. Hu, Matthew Johnston, H. Judkins, C. Lembke, Jose V. Lopez, J. A. Moore, M. Nizinski, B. Penta, I. C. Romero, J. R. Rooker, Mahmood S. Shivji, R. J. D. Wells, Michael Vecchione, M. Youngbluth
Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

DEEPEND: Deep-Pelagic Nekton Dynamics of the Gulf of Mexico, Tracey Sutton, April B. Cook, Kevin M. Boswell, Heather D. Bracken-Grissom, David Wells, David English, Ron Eytan, Dante Fenolio, Tamara M. Frank, Chad Lembke, Jose V. Lopez, Jon Moore, Martha Nizinski, Isabel C. Romero, Jay R. Rooker, Mahmood S. Shivji, Michael Vecchione, Brad Penta, Marsh Youngbluth
Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

DEEPEND: Deep-Pelagic Nekton Dynamics of the Gulf of Mexico, Tracey Sutton, April B. Cook, Kevin M. Boswell, Heather D. Bracken-Grissom, David Wells, David English, Ron Eytan, Dante Fenolio, Tamara M. Frank, Chad Lembke, Jose V. Lopez, Jon Moore, Martha Nizinski, Isabel C. Romero, Jay R. Rooker, Mahmood S. Shivji, Michael Vecchione, Brad Penta, Marsh Youngbluth
Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Population Structure and Dispersal of the Coral-Excavating Sponge Cliona delitrix, Andia Chaves Fonnegra, Kevin A. Feldheim, Jesse Secord, Jose V. Lopez
Marine & Environmental Sciences Faculty Articles

Dynamics of Marine Bacterial Community Diversity of the Coastal Waters of the Reefs, Inlets, and Wastewater Outfalls of Southeast Florida, Alexandra Mandina Campbell, Jay Fleisher, Christopher D. Sinigalliano, James R. White, Jose V. Lopez
Marine & Environmental Sciences Faculty Articles

Reconstruction of Family-Level Phylogenetic Relationships within Demospongiae (Porifera) Using Nuclear Encoded Housekeeping Genes, Malcolm S. Hill, April L. Hill, Jose V. Lopez, Kevin J. Peterson, Shirley Pomponi, Maria C. Diaz, Robert W. Thacker, Maja Adamska, Nicole Boury-Esnault, Paco Cárdenas, Andia Chaves-Fonnegra, Elizabeth Danka, Bre-Onna De Laine, Dawn Formica, Eduardo Hajdu, Gisele Lobo-Hajdu, Sarah Klontz, Christine C. Morrow, Jignasa Patel, Bernard Picton, Davide Pisani, Deborah Pohlmann, Niamh E. Redmond, John Reed, Stacy Richey, Ana Riesgo, Ewelina Rubin, Zach Russell, Klaus Rützler, Erik A. Sperling, Michael di Stefano, James E. Tarver, Allen G. Collins
Marine & Environmental Sciences Faculty Articles

Pyrosequencing of Bacterial Symbionts within Axinella corrugata Sponges: Diversity and Seasonal Variability, James R. White, Jignasa Patel, Andrea Ottesen, Gabriela Arce, Patricia Blackwelder, Jose V. Lopez
Marine & Environmental Sciences Faculty Articles

Co-Cultures of Pseudomonas aeruginosa and Roseobacter denitrificans Reveal Shifts in Gene Expression Levels Compared to Solo Cultures, Crystal A. Conway, Nwadiuto Esiobu, Jose V. Lopez
Marine & Environmental Sciences Faculty Articles

Suppression Subtractive Hybridization PCR Isolation of cDNAs from a Caribbean Soft Coral, Jose V. Lopez, Angela Ledger, Lory Z. Santiago-Vázquez, Mihai Pop, Dan D. Sommer, Llanie K. Ranzer, Robert A. Feldman, Russell G. Kerr
Marine & Environmental Sciences Faculty Articles

Florida Reef Sponges Harbor Coral Disease-Associated Microbes, Karita Negandhi, Patricia Blackwelder, Alexander V. Ereskovsky, Jose V. Lopez
Marine & Environmental Sciences Faculty Articles

Scleractinian Coral Recruitment to Reefs Physically Damaged by Ship Groundings, E. T. Rubin, Alison L. Moulding, Jose V. Lopez, David S. Gilliam, V. N. Kosmynin, Richard E. Dodge
Marine & Environmental Sciences Faculty Articles

Comparison of Bacterial Diversity within the Coral Reef Sponge, Axinella corrugata, and the Encrusting Coral Erythropodium caribaeorum, Jose V. Lopez, L. K. Ranzer, A. Ledger, B. Schoch, A. Duckworth, P. J. McCarthy, R. G. Kerr
Marine & Environmental Sciences Faculty Articles

Diverse Bacterial PKS Sequences Derived from Okadaic Acid-Producing Dinoflagellates, Roberto Perez, Li Liu, Jose V. Lopez, Tianying An, Kathleen S. Rein
Marine & Environmental Sciences Faculty Articles

Some Preservation Techniques for (Deep Water) Coral Samples for Subsequent Molecular Studies: A Special Supplement from Harbor Branch Oceanographic Institute, Jose V. Lopez
Marine & Environmental Sciences Faculty Reports

Metabolites from the Marine-Derived Fungus Chromocleista sp. Isolated from a Deep-Water Sediment Sample Collected in the Gulf of Mexico, Young Chul Park, Sarath P. Gunasekera, Jose V. Lopez, Peter J. McCarthy, Amy E. Wright
Marine & Environmental Sciences Faculty Articles

The Perfect Microbial Symbiosis Hotel: Marine Sponges, Jose V. Lopez
Marine & Environmental Sciences Faculty Articles

Andros Island Flora and Fauna in the New Millennium, Jose V. Lopez, Cheryl L. Peterson, Felix Morales, Luther Brown
Marine & Environmental Sciences Faculty Articles

Molecular Techniques Reveal Wide Phyletic Diversity of Heterotrophic Microbes Associated with Discodermia spp. (Porifera: Demospongiae), Jose V. Lopez, Peter J. McCarthy, Kathleen E. Janda, Robin Willoughby, Shirley A. Pomponi
Marine & Environmental Sciences Faculty Articles

In Vitro Production of Marine-Derived Compounds, Shirley A. Pomponi, Robin Willoughby, Amy E. Wright, Claudia Pecorella, Susan H. Sennett, Jose V. Lopez, Gail Samples
Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Discrimination of Species in the Montastrea annularis Complex using Multiple Genetic Loci, Jose V. Lopez, Nancy Knowlton
Marine & Environmental Sciences Faculty Articles

Molecular Evolution of Numt, a Recent Transfer and Tandem Amplification of Mitochondrial DNA into the Nuclear Genome of the Domestic Cat (Felis catus), Jose V. Lopez
Oceanography Faculty Theses and Dissertations

Taking a Cat Map: Genome Analysis by Supercomputer, Jose V. Lopez
Marine & Environmental Sciences Faculty Articles