Part of the Physical Sciences and Mathematics Commons

Works by Clemencia Pinilla in Physical Sciences and Mathematics

2023

Restoring Susceptibility to Aminoglycosides: Identifying Small Molecule Inhibitors of Enzymatic Inactivation, Angel J. Magaña, Jan Sklenicka, Clemencia Pinilla, Marc Giulianotti, Prem Chapagain, Radleigh Santos, Maria Soledad Ramirez, Marcelo E. Tolmasky
Mathematics Faculty Articles

Discovery of Mixed Pharmacology Melanocortin-3 Agonists and Melanocortin-4 Receptor Tetrapeptide Antagonist Compounds (TACOs) Based on the Sequence Ac-Xaa1-Arg-(pI)DPhe-Xaa4-NH2, Skye R. Doering, Katie T. Freeman, Sathya M. Schnell, Erica M. Haslach, Marvin Dirain, Ginamarie Debevec, Phaedra Geer, Radleigh Santos, Marc A. Giulianotti, Clemencia Pinilla, Jon R. Appel, Robert Charles Speth, Richard A. Houghten, Carrie Haskell-Luevano
Robert Speth

2021

Functional Mixture-Based Positional Scan Identifies a Library of Antagonist Tetrapeptide Sequences (LAtTeS) with Nanomolar Potency for the Melanocortin-4 Receptor and Equipotent with the Endogenous AGRP(86-132) Antagonist, Mark D. Ericson, Skye R. Doering, Courtney M. Larson, Katie T. Freeman, Travis M. LaVoi, Haley M. Donow, Radleigh G. Santos, Rachel H. Cho, Zoe M. Koerperich, Marc A. Giulianotti, Clemencia Pinilla, Richard A. Houghten, Carrie Haskell-Luevano
Mathematics Faculty Articles

Inhibition of Aminoglycoside 6’-N-Acetyltransferase Type Ib [Aac(6′)-Ib]: Structure-Activity Relationship of Substituted Pyrrolidine Pentamine Derivatives as Inhibitors, Kenneth Rocha, Jesus Magallon, Craig Reeves, Kimberly Phan, Peter Vu, Crista L. Oakley-Havens, Stella Kwan, Maria S. Ramirez, Travis LaVoi, Haley Donow, Prem Chapagain, Radleigh Santos, Clemencia Pinilla, Marc A. Giulianotti, Marcelo E. Tolmasky
Mathematics Faculty Articles

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CD4+ T Cells in the Lungs of Acute Sarcoidosis Patients Recognize an Aspergillus Nidulans Epitope, Sarah A. Greaves, Avinash Ravindran, Radleigh Santos, Lan Chen, Michael T. Falta, Yang Wang, Angela M. Mitchell, Shaikh M. Atif, Douglas G. Mack, Alex N. Tinega, Lisa A. Maier, Shaodong Dai, Clemencia Pinilla, Johan Grunewald, Andrew P. Fontenot
Mathematics Faculty Articles

Single cell analysis of host response to helminth infection reveals the clonal breadth, heterogeneity, and tissue-specific programming of the responding CD4+ T cell repertoire, Ivy K. Brown, Nathan Dyjack, Mindy M. Miller, Harsha Krovi, Cydney Rios, Rachel Woolaver, Laura Harmacek, Ting Hui Tu, Brian P. O’Connor, Thomas Danhorn, Brian Vestal, Laurent Gapin, Clemencia Pinilla, Max A. Seibold, James Scott-Browne, Radleigh G. Santos, R. Lee Reinhardt
Mathematics Faculty Articles

Beryllium-specific CD4+ T cells induced by chemokine neoantigens perpetuate inflammation, Michael T. Falta, Jeremy C. Crawford, Alex N. Tinega, Laurie G. Landry, Frances Crawford, Douglas G. Mack, Allison K. Martin, Shaikh M. Atif, Li Li, Radleigh Santos, Maki Nakayama, John W. Kappler, Lisa A. Maier, Paul G. Thomas, Clemencia Pinilla, Andrew Fontenot
Radleigh Santos

Beryllium-specific CD4+ T cells induced by chemokine neoantigens perpetuate inflammation, Michael T. Falta, Jeremy C. Crawford, Alex N. Tinega, Laurie G. Landry, Frances Crawford, Douglas G. Mack, Allison K. Martin, Shaikh M. Atif, Li Li, Radleigh Santos, Maki Nakayama, John W. Kappler, Lisa A. Maier, Paul G. Thomas, Clemencia Pinilla, Andrew Fontenot
Mathematics Faculty Articles

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2020

Identification of Peptides Combination That Successfully Block Canditatus Liberibacter asiaticus Transfer from Asian Citrus Psyllid Nymphs to Adults, Dov Borovsky, Eldesouky Ammar, Kasie Sturgeon, Erica Rose Warwick, Marc Giulianotti, Radleigh Santos, Clemencia Pinilla, Robert G. Shatters
Radleigh Santos

High-Throughput Flow Cytometry Screening of Multidrug Efflux Systems, Mark Haynes, Matthew Garcia, Ryan Peters, Anna Waller, Pietro Tedesco, Oleg Ursu, Cristian G. Bologa, Radleigh Santos, Clemencia Pinilla, Terry H. Wu, Julie A. Lovchik, Tudor I. Oprea, Larry A. Sklar, George P. Tegos
Radleigh Santos

CD4+ T Cell Antigen Discovery in Sarcoidosis, Sarah A. Greaves, Angela Mitchell, Michael Falta, Radleigh Santos, Clemencia Pinilla, Andrew P. Fontenot
Radleigh Santos

Discovery of Selective Nanomolar Potent Melanocortin-3 Receptor Ligands, Skye R. Doering, Phaedra Geer, Radleigh Santos, Marc Giulianotti, Clemencia Pinilla, Jon R. Appel, Richard A. Houghten, Carrie Haskell-Luevano
Radleigh Santos

A Randomized Double-Blind Placebo-Controlled Phase II Trial of Dendritic Cell Vaccine ICT-107 in Newly Diagnosed Patients with Glioblastoma, Patrick Y. Wen, David A. Reardon, Terri S. Armstrong, Surasak Phupanich, Robert D. Aiken, Joseph C. Landolfi, William T. Curry, Jay-Jiguang Zhu, Michael Glantz, David M. Peereboom, James M. Markert, Renato LaRocca, Donald M. O'Rourke, Karen Fink, Lyndon Kim, Michael Gruber, Glenn J. Lesser, Edward Pan, Santosh Kesari, Alona Muzikansky, Clemencia Pinilla, Radleigh Santos, John S. Yu
Radleigh Santos

GDP-L-Fucose Synthase is a CD4+ T Cell–Specific Autoantigen in DRB3*02:02 Patients with Multiple Sclerosis, Raquel Planas, Radleigh Santos, Paula Tomas-Ojer, Carolina Cruciani, Andreas Lutterotti, Wolfgang Faigle, Nicole Schaeren-Wiemers, Carmen Espejo, Herena Eixarch, Clemencia Pinilla, Roland Martin, Mireia Sospedra
Radleigh Santos

Discovery of Polypharmacological Melanocortin-3 and -4 Receptor Probes and Identification of a 100-Fold Selective nM MC3R Agonist Versus a μM MC4R Partial Agonist, Katlyn A. Fleming, Katie T. Freeman, Mike D. Powers, Radleigh Santos, Ginamarie Debevac, Marc Giulianotti, Richard A. Houghten, Skye R. Doering, Clemencia Pinilla, Carrie Haskell-Luevano
Radleigh Santos

B - T Cell Interactions Activate and Maintain Brain-Homing T Cells in Multiple Sclerosis, I. Jelcic, F. Al Nimer, J. Wang, V. Lentsch, R. Planas, A. Madjovski, W. Faigle, Clemencia Pinilla, Radleigh Santos, C. Hammer, Y. Ortiz, L. Opitz, M. Khademi, A. Lutterotti, T. Olsson, F. Piehl, M. Sospedra, R. Martin
Radleigh Santos

Memory B Cells Activate Brain-Homing, Autoreactive CD4+ T Cells in Multiple Sclerosis, Ivan Jelcic, Faiez Al Nimer, Jian Wang, Verena Lentsch, Raquel Planas, Ilijas Jelcic, Aleksandar Madjovski, Sabrina Ruhrmann, Wolfgang Faigle, Katrin Frauenknecht, Clemencia Pinilla, Radleigh Santos, Christian Hammer, Yanneth Ortiz, Lennart Opitz, Hans Gronlund, Gerhard Rogler, Onur Boyman, Richard Reynolds, Andreas Lutterotti, Mohsen Khademi, Tomas Olsson, Frederik Piehl, Mireia Sospedra, Roland Martin
Radleigh Santos

2019

A Randomized Double-Blind Placebo-Controlled Phase II Trial of Dendritic Cell Vaccine ICT-107 in Newly Diagnosed Patients with Glioblastoma, Patrick Y. Wen, David A. Reardon, Terri S. Armstrong, Surasak Phupanich, Robert D. Aiken, Joseph C. Landolfi, William T. Curry, Jay-Jiguang Zhu, Michael Glantz, David M. Peereboom, James M. Markert, Renato LaRocca, Donald M. O'Rourke, Karen Fink, Lyndon Kim, Michael Gruber, Glenn J. Lesser, Edward Pan, Santosh Kesari, Alona Muzikansky, Clemencia Pinilla, Radleigh Santos, John S. Yu
Mathematics Faculty Articles

CD4+ T Cell Antigen Discovery in Sarcoidosis, Sarah A. Greaves, Angela Mitchell, Michael Falta, Radleigh Santos, Clemencia Pinilla, Andrew P. Fontenot
Mathematics Faculty Proceedings, Presentations, Speeches, Lectures

Discovery of Polypharmacological Melanocortin-3 and -4 Receptor Probes and Identification of a 100-Fold Selective nM MC3R Agonist Versus a μM MC4R Partial Agonist, Katlyn A. Fleming, Katie T. Freeman, Mike D. Powers, Radleigh Santos, Ginamarie Debevac, Marc Giulianotti, Richard A. Houghten, Skye R. Doering, Clemencia Pinilla, Carrie Haskell-Luevano
Mathematics Faculty Articles

2018

B - T Cell Interactions Activate and Maintain Brain-Homing T Cells in Multiple Sclerosis, I. Jelcic, F. Al Nimer, J. Wang, V. Lentsch, R. Planas, A. Madjovski, W. Faigle, Clemencia Pinilla, Radleigh Santos, C. Hammer, Y. Ortiz, L. Opitz, M. Khademi, A. Lutterotti, T. Olsson, F. Piehl, M. Sospedra, R. Martin
Mathematics Faculty Proceedings, Presentations, Speeches, Lectures

GDP-L-Fucose Synthase is a CD4+ T Cell–Specific Autoantigen in DRB3*02:02 Patients with Multiple Sclerosis, Raquel Planas, Radleigh Santos, Paula Tomas-Ojer, Carolina Cruciani, Andreas Lutterotti, Wolfgang Faigle, Nicole Schaeren-Wiemers, Carmen Espejo, Herena Eixarch, Clemencia Pinilla, Roland Martin, Mireia Sospedra
Mathematics Faculty Articles

Memory B Cells Activate Brain-Homing, Autoreactive CD4+ T Cells in Multiple Sclerosis, Ivan Jelcic, Faiez Al Nimer, Jian Wang, Verena Lentsch, Raquel Planas, Ilijas Jelcic, Aleksandar Madjovski, Sabrina Ruhrmann, Wolfgang Faigle, Katrin Frauenknecht, Clemencia Pinilla, Radleigh Santos, Christian Hammer, Yanneth Ortiz, Lennart Opitz, Hans Gronlund, Gerhard Rogler, Onur Boyman, Richard Reynolds, Andreas Lutterotti, Mohsen Khademi, Tomas Olsson, Frederik Piehl, Mireia Sospedra, Roland Martin
Mathematics Faculty Articles

Identification of a Small Molecule Inhibitor of the Aminoglycoside 6'- N -acetyltransferase Type Ib [AAC(6')-Ib] Using Mixture-Based Combinatorial Libraries, Tung Tran, Kevin Chiem, Saumya Jani, Brock A. Arivett, David L. Lin, Rupali Lad, Veronica Jimenez, Mary B. Farone, Ginamarie Debevac, Radleigh Santos, Marc Giulianotti, Clemencia Pinilla, Marcelo E. Tolmasky
Mathematics Faculty Articles

Discovery of Selective Nanomolar Potent Melanocortin-3 Receptor Ligands, Skye R. Doering, Phaedra Geer, Radleigh Santos, Marc Giulianotti, Clemencia Pinilla, Jon R. Appel, Richard A. Houghten, Carrie Haskell-Luevano
Mathematics Faculty Proceedings, Presentations, Speeches, Lectures

High-Throughput Flow Cytometry Screening of Multidrug Efflux Systems, Mark Haynes, Matthew Garcia, Ryan Peters, Anna Waller, Pietro Tedesco, Oleg Ursu, Cristian G. Bologa, Radleigh Santos, Clemencia Pinilla, Terry H. Wu, Julie A. Lovchik, Tudor I. Oprea, Larry A. Sklar, George P. Tegos
Mathematics Faculty Books and Book Chapters

2017

Identification of Peptides Combination That Successfully Block Canditatus Liberibacter asiaticus Transfer from Asian Citrus Psyllid Nymphs to Adults, Dov Borovsky, Eldesouky Ammar, Kasie Sturgeon, Erica Rose Warwick, Marc Giulianotti, Radleigh Santos, Clemencia Pinilla, Robert G. Shatters
Mathematics Faculty Proceedings, Presentations, Speeches, Lectures

Melanocortin Ligands and Methods of Use Thereof, Carrie Haskell-Luevano, Skye R. Doering, Jon R. Appel, Marc Giulianotti, Richard A. Houghten, Clemencia Pinilla, Radleigh Santos
Mathematics Faculty Proceedings, Presentations, Speeches, Lectures

Methodological approach to the ex vivo expansion and detection of T. cruzi-specific T cells from chronic Chagas disease patients, Gonzalo R. Acevedo, Silvia A. Longhi, Alcinette Bunying, Nazila Sabri, Augusto Atienza, Maria P. Zago, Radleigh Santos, Valeria A. Judkowski, Clemencia Pinilla, Karina A. Gomez
Mathematics Faculty Articles

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Discovery of Mixed Pharmacology Melanocortin-3 Agonists and Melanocortin-4 Receptor Tetrapeptide Antagonist Compounds (TACOs) Based on the Sequence Ac-Xaa1-Arg-(pI)DPhe-Xaa4-NH2, Skye R. Doering, Katie T. Freeman, Sathya M. Schnell, Erica M. Haslach, Marvin Dirain, Ginamarie Debevec, Phaedra Geer, Radleigh Santos, Marc A. Giulianotti, Clemencia Pinilla, Jon R. Appel, Robert Charles Speth, Richard A. Houghten, Carrie Haskell-Luevano
Mathematics Faculty Articles

2016

Categorizing immune responders with fusion metrics and simulation for association to survival & progression free survival with immune response in HLA-A2+ patients with GBM from a phase 2 trial of dendritic cell (DC) immunotherapy (ICT-107)., Radleigh Santos, Clemencia Pinilla, Steve J. Swanson, Anthony Gringeri, John Yu
Mathematics Faculty Proceedings, Presentations, Speeches, Lectures

Using Fusion of Response Metrics and Monte Carlo Simulation to Determine Immune Response in Cancer Immunotherapy Patients, Radleigh Santos, Alcinette Bunying, Nazila Sabri, John Yu, Steve J. Swanson, Valeria A. Judkowski, Pedro Romero, Sylvia Janetzki, Clemencia Pinilla
Mathematics Faculty Proceedings, Presentations, Speeches, Lectures

2015

Association of Survival and Progression-Free Survival with Immune Response in HLA-A2+ Newly- Diagnosed GBM Patients in Randomized Double-Blind Placebo-Controlled Phase 2 Trial of Dentritic Cell (DC) Immunotherapy with ICT-107, Patrick Wen, David Reardon, Surasak Phuphanich, Robert Aiken, Joseph Landolfi, William Curry, Jay-Jiguang Zhu, Michael Glantz, David Peereboom, James Markert, Renato Larocca, Donald O'Rourke, Karen Fink, Lyndon Kim, Michael Gruber, Glenn Lesser, Ed Pan, Radleigh Santos, Clemencia Pinilla, John Yu
Mathematics Faculty Proceedings, Presentations, Speeches, Lectures

Statistically significant association of glioblastoma immunotherapy phase II clinical study (ICT-107) treatment and survival to immune response using a novel comprehensive ELISPOT analysis., Radleigh Santos, Anthony Gringeri, John Yu, Sylvia Janetzki, Valeria A. Judkowski, Clemencia Pinilla
Mathematics Faculty Proceedings, Presentations, Speeches, Lectures

Investigating the Role of the Host Multidrug Resistance Associated Protein Transporter Family in Burkholderia cepacia Complex Pathogenicity Using a Caenorhabditis elegans Infection Model, Pietro Tedesco, Marco Visone, Ermenegilda Parrilli, Maria Luisa Tutino, Elena Perrin, Isabel Maida, Renato Fani, Francesco Ballestriero, Radleigh Santos, Clemencia Pinilla, Elia Di Schiavi, George Tegos, Donatella de Pascale
Mathematics Faculty Articles

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Antigen Discovery for the Identification of Vaccine Candidates and Biomarkers Using a T Cell Driven Approach in Combination with Positional Scanning Peptide Libraries, Valeria A. Judkowski, Radleigh Santos, Gonzalo R. Acevedo, Marc Giulianotti, Jon R. Appel, Silvia A. Longhi, Karina A. Gomez, Clemencia Pinilla
Mathematics Faculty Articles

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2014

Improvement of IFNg ELISPOT Performance Following Overnight Resting of Frozen PBMC Samples Confirmed Through Rigorous Statistical Analysis, Radleigh Santos, Alcinette Bunying, Nazila Sabri, John Yu, Anthony Gringeri, James Bender, Sylvia Janetzki, Clemencia Pinilla, Valeria A. Judkowski
Mathematics Faculty Articles

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Cytokine Production but Lack of Proliferation in Peripheral Blood Mononuclear Cells from Chronic Chagas' Disease Cardiomyopathy Patients in Response to T. cruzi Ribosomal P Proteins, Silvia A. Longhi, Augusto Atienza, Graciela Perez Prados, Alcinette Buying, Virginia Balouz, Carlos A. Buscaglia, Radleigh Santos, Laura M. Tasso, Ricardo Bonato, Pablo Chiale, Clemencia Pinilla, Valeria A. Judkowski, Karina A. Gomez
Mathematics Faculty Articles

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Identification of Tetrapeptides from a Mixture Based Positional Scanning Library That Can Restore nM Full Agonist Function of the L106P, I69T, I102S, A219V, C271Y, and C271R Human Melanocortin-4 Polymorphic Receptors (hMC4Rs), Erica M. Haslach, Huisuo Huang, Marvin Dirain, Ginamarie Debevec, Phaedra Geer, Radleigh Santos, Marc Giulianotti, Clemencia Pinilla, Jon R. Appel, Skye R. Doering, Michael A. Walters, Richard A. Houghten, Carrie Haskell-Luevano
Mathematics Faculty Articles

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2013

Selective Agonists and Antagonists of Formylpeptide Receptors: Duplex Flow Cytometry and Mixture-based Positional Scanning Libraries, Clemencia Pinilla, Bruce S. Edwards, Jon R. Appel, Tina Yates-Gibbins, Marc Giulianotti, Jose L. Medina-Franco, Susan M. Young, Radleigh Santos, Larry A. Sklar, Richard A. Houghten
Mathematics Faculty Articles

Identification of beryllium-dependent peptides recognized by CD4+ T cells in chronic beryllium disease, Michael T. Falta, Clemencia Pinilla, Douglas G. Mack, Alex N. Tinega, Francis Crawford, Marc Giulianotti, Radleigh Santos, Gina M. Clayton, Yuxiao Wang, Xuewu Zhang, Lisa A. Maier, Philippa Marrack, John W. Kappler, Andrew P. Fontenot
Mathematics Faculty Articles

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Rapid Scanning Structure–Activity Relationships in Combinatorial Data Sets: Identification of Activity Switches, Jose L. Medina-Franco, Bruce S. Edwards, Clemencia Pinilla, Jon R. Appel, Marc Giulianotti, Radleigh Santos, Austin B. Yongye, Larry A. Sklar, Richard A. Houghten
Mathematics Faculty Articles

The Mathematics of a Successful Deconvolution: A Quantitative Assessment of Mixture-Based Combinatorial Libraries Screened Against Two Formylpeptide Receptors, Radleigh Santos, Jon R. Appel, Marc Giulianotti, Bruce S. Edwards, Larry A. Sklar, Richard A. Houghten, Clemencia Pinilla
Mathematics Faculty Articles

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2012

Use and implications of the harmonic mean model on mixtures for basic research and drug discovery, Radleigh Santos, Marc Giulianotti, Colette T. Dooley, Clemencia Pinilla, Jon R. Appel, Richard A. Houghten
Mathematics Faculty Proceedings, Presentations, Speeches, Lectures

Novel T cell driven approach leads to the identification of immunoprevalent antigens, Valeria A. Judkowski, Radleigh G. Santos, Alcinette Bunying, Marc A. Giulianotti, Jon R. Appel, Clemencia Pinilla
Mathematics Faculty Articles

2011

GM-CSF Production Allows the Identification of Immunoprevalent Antigens Recognized by Human CD4+ T Cells Following Smallpox Vaccination, Valeria A. Judkowski, Alcinette Bunying, Feng Ge, Jon R. Appel, Kingyee Law, Atima Sharma, Claudia Raja-Gabaglia, Patricia Norori, Radleigh Santos, Marc Giulianotti, Mark K. Slifka, Daniel C. Douek, Barney S. Graham, Clemencia Pinilla
Mathematics Faculty Articles

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Use and Implications of the Harmonic Mean Model on Mixtures for Basic Research and Drug Discovery, Radleigh Santos, Marc Giulianotti, Colette T. Dooley, Clemencia Pinilla, Jon R. Appel, Richard A. Houghten
Mathematics Faculty Articles