Part of the Life Sciences Commons

Works by Jose Lopez in Life Sciences

2023

Updates of the Global Invertebrate Genome Alliance (GIGA) for Comparative Genomics, Jose Lopez
Jose Lopez

Draft Genome Sequence of Nitrosomonas sp. Strain APG5, a Betaproteobacterial Ammonia-Oxidizing Bacterium Isolated from Beach Sand, Hidetoshi Urakawa, Jorie L. Skutas, Jose Lopez
Jose Lopez

2021

Gut Microbiome Diversity Is Associated with Sleep Physiology in Humans, Robert Smith, Cole Easson, Sarah M. Lyle, Ritishka Kapoor, Chase P. Donnelly, Eileen Davidson, Esha Parikh, Jose Lopez, Jaime L. Tartar
Jaime Tartar

Gut Microbiome Diversity Is Associated with Sleep Physiology in Humans, Robert Smith, Cole Easson, Sarah M. Lyle, Ritishka Kapoor, Chase P. Donnelly, Eileen Davidson, Esha Parikh, Jose Lopez, Jaime L. Tartar
Jaime Tartar

Gut Microbiome Diversity Is Associated with Sleep Physiology in Humans, Robert Smith, Cole Easson, Sarah M. Lyle, Ritishka Kapoor, Chase P. Donnelly, Eileen Davidson, Esha Parikh, Jose Lopez, Jaime L. Tartar
Jaime Tartar

A Multidisciplinary Approach to Investigate Deep-Pelagic Ecosystem Dynamics in the Gulf of Mexico Following Deepwater Horizon, April Cook, Andrea Bernard, Kevin M. Boswell, Heather Bracken-Grissom Dr., Marta D'Elia, Sergio DeRada, Cole Easson, David English, Ron Eytan, Tamara Frank, Chuanmin Hu, Matt Johnston, Heather Judkins, Chad Lembke, Jose Lopez, Rosanna Milligan, Jon A. Moore, Brad Penta, Nina Pruzinsky, John A. Quinlan, Travis M. Richards, Isabel C. Romero, Mahmood S. Shivji, Michael Vecchione, Max D. Weber, R.J. David Wells, Tracey Sutton
Matthew Johnston

A Multidisciplinary Approach to Investigate Deep-Pelagic Ecosystem Dynamics in the Gulf of Mexico Following Deepwater Horizon, April Cook, Andrea Bernard, Kevin M. Boswell, Heather Bracken-Grissom Dr., Marta D'Elia, Sergio DeRada, Cole Easson, David English, Ron Eytan, Tamara Frank, Chuanmin Hu, Matt Johnston, Heather Judkins, Chad Lembke, Jose Lopez, Rosanna Milligan, Jon A. Moore, Brad Penta, Nina Pruzinsky, John A. Quinlan, Travis M. Richards, Isabel C. Romero, Mahmood S. Shivji, Michael Vecchione, Max D. Weber, R.J. David Wells, Tracey Sutton
Jose Lopez

Draft Genome of Bugula neritina, a Colonial Animal Packing Powerful Symbionts and Potential Medicines, Mikhail Rayko, Aleksey Komissarov, Jason C. Kwan, Grace Lim-Fong, Adelaide C. Rhodes, Sergey Kliver, Polina Kuchur, Stephen James O'Brien, Jose Lopez
Jose Lopez

Draft Genome of Bugula neritina, a Colonial Animal Packing Powerful Symbionts and Potential Medicines, Mikhail Rayko, Aleksey Komissarov, Jason C. Kwan, Grace Lim-Fong, Adelaide C. Rhodes, Sergey Kliver, Polina Kuchur, Stephen James O'Brien, Jose Lopez
Stephen O'Brien

A Multidisciplinary Approach to Investigate Deep-Pelagic Ecosystem Dynamics in the Gulf of Mexico Following Deepwater Horizon, April Cook, Andrea Bernard, Kevin M. Boswell, Heather Bracken-Grissom Dr., Marta D'Elia, Sergio DeRada, Cole Easson, David English, Ron Eytan, Tamara Frank, Chuanmin Hu, Matt Johnston, Heather Judkins, Chad Lembke, Jose Lopez, Rosanna Milligan, Jon A. Moore, Brad Penta, Nina Pruzinsky, John A. Quinlan, Travis M. Richards, Isabel C. Romero, Mahmood S. Shivji, Michael Vecchione, Max D. Weber, R.J. David Wells, Tracey Sutton
Mahmood Shivji

A Multidisciplinary Approach to Investigate Deep-Pelagic Ecosystem Dynamics in the Gulf of Mexico Following Deepwater Horizon, April Cook, Andrea Bernard, Kevin M. Boswell, Heather Bracken-Grissom Dr., Marta D'Elia, Sergio DeRada, Cole Easson, David English, Ron Eytan, Tamara Frank, Chuanmin Hu, Matt Johnston, Heather Judkins, Chad Lembke, Jose Lopez, Rosanna Milligan, Jon A. Moore, Brad Penta, Nina Pruzinsky, John A. Quinlan, Travis M. Richards, Isabel C. Romero, Mahmood S. Shivji, Michael Vecchione, Max D. Weber, R.J. David Wells, Tracey Sutton
Tamara Frank

A Multidisciplinary Approach to Investigate Deep-Pelagic Ecosystem Dynamics in the Gulf of Mexico Following Deepwater Horizon, April Cook, Andrea Bernard, Kevin M. Boswell, Heather Bracken-Grissom Dr., Marta D'Elia, Sergio DeRada, Cole Easson, David English, Ron Eytan, Tamara Frank, Chuanmin Hu, Matt Johnston, Heather Judkins, Chad Lembke, Jose Lopez, Rosanna Milligan, Jon A. Moore, Brad Penta, Nina Pruzinsky, John A. Quinlan, Travis M. Richards, Isabel C. Romero, Mahmood S. Shivji, Michael Vecchione, Max D. Weber, R.J. David Wells, Tracey Sutton
Rosanna Milligan

A Multidisciplinary Approach to Investigate Deep-Pelagic Ecosystem Dynamics in the Gulf of Mexico Following Deepwater Horizon, April Cook, Andrea Bernard, Kevin M. Boswell, Heather Bracken-Grissom Dr., Marta D'Elia, Sergio DeRada, Cole Easson, David English, Ron Eytan, Tamara Frank, Chuanmin Hu, Matt Johnston, Heather Judkins, Chad Lembke, Jose Lopez, Rosanna Milligan, Jon A. Moore, Brad Penta, Nina Pruzinsky, John A. Quinlan, Travis M. Richards, Isabel C. Romero, Mahmood S. Shivji, Michael Vecchione, Max D. Weber, R.J. David Wells, Tracey Sutton
Tracey Sutton

A Multidisciplinary Approach to Investigate Deep-Pelagic Ecosystem Dynamics in the Gulf of Mexico Following Deepwater Horizon, April Cook, Andrea Bernard, Kevin M. Boswell, Heather Bracken-Grissom Dr., Marta D'Elia, Sergio DeRada, Cole Easson, David English, Ron Eytan, Tamara Frank, Chuanmin Hu, Matt Johnston, Heather Judkins, Chad Lembke, Jose Lopez, Rosanna Milligan, Jon A. Moore, Brad Penta, Nina Pruzinsky, John A. Quinlan, Travis M. Richards, Isabel C. Romero, Mahmood S. Shivji, Michael Vecchione, Max D. Weber, R.J. David Wells, Tracey Sutton
Andrea Bernard

Detecting Personal Microbiota Signatures at Artificial Crime Scenes, Jarrad T. Hampton-Marcell, Peter Larsen, Tifani Anton, Lauren Cralle, Naseer Sangwan, Simon Lax, Neil Gottel, Mariana Salas-Garcia, Candace Young, George Duncan, Jose Lopez, Jack A. Gilbert
George Duncan

2020

A Multidisciplinary Approach to Investigate Deep-Pelagic Ecosystem Dynamics in the Gulf of Mexico Following Deepwater Horizon, April Cook, Andrea Bernard, Kevin M. Boswell, Heather Bracken-Grissom Dr., Marta D'Elia, Sergio DeRada, Cole Easson, David English, Ron Eytan, Tamara Frank, Chuanmin Hu, Matt Johnston, Heather Judkins, Chad Lembke, Jose Lopez, Rosanna Milligan, Jon A. Moore, Brad Penta, Nina Pruzinsky, John A. Quinlan, Travis M. Richards, Isabel C. Romero, Mahmood S. Shivji, Michael Vecchione, Max D. Weber, R.J. David Wells, Tracey Sutton
Marine & Environmental Sciences Faculty Articles

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Draft Genome of Bugula neritina, a Colonial Animal Packing Powerful Symbionts and Potential Medicines, Mikhail Rayko, Aleksey Komissarov, Jason C. Kwan, Grace Lim-Fong, Adelaide C. Rhodes, Sergey Kliver, Polina Kuchur, Stephen James O'Brien, Jose Lopez
Biology Faculty Articles

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Detecting Personal Microbiota Signatures at Artificial Crime Scenes, Jarrad T. Hampton-Marcell, Peter Larsen, Tifani Anton, Lauren Cralle, Naseer Sangwan, Simon Lax, Neil Gottel, Mariana Salas-Garcia, Candace Young, George Duncan, Jose Lopez, Jack A. Gilbert
Jose Lopez

Host Population Genetics and Biogeography Structure the Microbiome of the Sponge Cliona delitrix, Cole Easson, Andia Chaves-Fonnegra, Robert W. Thacker, Jose Lopez
Jose Lopez

Microbiomes of a Corallivore (Hermodice carunculata): Where in the Worm are the Coral Microbes?, Candace J. Grimes, J. LaBonte, Jose Lopez, A. Schulze
Jose Lopez

Detecting Personal Microbiota Signatures at Artificial Crime Scenes, Jarrad T. Hampton-Marcell, Peter Larsen, Tifani Anton, Lauren Cralle, Naseer Sangwan, Simon Lax, Neil Gottel, Mariana Salas-Garcia, Candace Young, George Duncan, Jose Lopez, Jack A. Gilbert
Biology Faculty Articles

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Microbiomes of a Corallivore (Hermodice carunculata): Where in the Worm are the Coral Microbes?, Candace J. Grimes, J. LaBonte, Jose Lopez, A. Schulze
Biology Faculty Proceedings, Presentations, Speeches, Lectures

Host Population Genetics and Biogeography Structure the Microbiome of the Sponge Cliona delitrix, Cole Easson, Andia Chaves-Fonnegra, Robert W. Thacker, Jose Lopez
Biology Faculty Articles

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2019

Gut Microbiome Diversity Is Associated with Sleep Physiology in Humans, Robert Smith, Cole Easson, Sarah M. Lyle, Ritishka Kapoor, Chase P. Donnelly, Eileen Davidson, Esha Parikh, Jose Lopez, Jaime L. Tartar
Jose Lopez

Diverse deep-sea anglerfishes share a genetically reduced luminous symbiont that is acquired from the environment, Lydia Baker, Lindsay L. Freed, Cole Easson, Jose Lopez, Dante Fenolio, Tracey Sutton, Spencer Nyholm, Tory Hendry
Jose Lopez

Characterization of the microbiome and bioluminescent symbionts across life stages of ceratioid anglerfishes of the gulf of mexico, Lindsay L. Freed, Cole Easson, Lydia Baker, D. Fenolio, Tracey Sutton, Yasmin Khan, Patricia Blackwelder, Tory Hendry, Jose Lopez
Jose Lopez

Gut Microbiome Diversity Is Associated with Sleep Physiology in Humans, Robert Smith, Cole Easson, Sarah M. Lyle, Ritishka Kapoor, Chase P. Donnelly, Eileen Davidson, Esha Parikh, Jose Lopez, Jaime L. Tartar
Robert Smith

Characterization of the microbiome and bioluminescent symbionts across life stages of ceratioid anglerfishes of the gulf of mexico, Lindsay L. Freed, Cole Easson, Lydia Baker, D. Fenolio, Tracey Sutton, Yasmin Khan, Patricia Blackwelder, Tory Hendry, Jose Lopez
Tracey Sutton

Diverse deep-sea anglerfishes share a genetically reduced luminous symbiont that is acquired from the environment, Lydia Baker, Lindsay L. Freed, Cole Easson, Jose Lopez, Dante Fenolio, Tracey Sutton, Spencer Nyholm, Tory Hendry
Tracey Sutton

Characterization of the microbiome and bioluminescent symbionts across life stages of ceratioid anglerfishes of the gulf of mexico, Lindsay L. Freed, Cole Easson, Lydia Baker, D. Fenolio, Tracey Sutton, Yasmin Khan, Patricia Blackwelder, Tory Hendry, Jose Lopez
Patricia Blackwelder

Diverse deep-sea anglerfishes share a genetically reduced luminous symbiont that is acquired from the environment, Lydia Baker, Lindsay L. Freed, Cole Easson, Jose Lopez, Dante Fenolio, Tracey Sutton, Spencer Nyholm, Tory Hendry
Biology Faculty Articles

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Gut Microbiome Diversity Is Associated with Sleep Physiology in Humans, Robert Smith, Cole Easson, Sarah M. Lyle, Ritishka Kapoor, Chase P. Donnelly, Eileen Davidson, Esha Parikh, Jose Lopez, Jaime L. Tartar
Biology Faculty Articles

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Characterization of the microbiome and bioluminescent symbionts across life stages of ceratioid anglerfishes of the gulf of mexico, Lindsay L. Freed, Cole Easson, Lydia Baker, D. Fenolio, Tracey Sutton, Yasmin Khan, Patricia Blackwelder, Tory Hendry, Jose Lopez
Biology Faculty Articles

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Inevitable Future: Space Colonization Beyond Earth with Microbes First, Jose Lopez, Raquel S. Peixoto, Alexandre S. Rosado
Jose Lopez

After the Taxonomic Identification Phase: Addressing the Functions of Symbiotic Communities Within Marine Invertebrates, Jose Lopez
Jose Lopez

Inevitable Future: Space Colonization Beyond Earth with Microbes First, Jose Lopez, Raquel S. Peixoto, Alexandre S. Rosado
Biology Faculty Articles

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Draft Genome Sequence of Nitrosomonas sp. Strain APG5, a Betaproteobacterial Ammonia-Oxidizing Bacterium Isolated from Beach Sand, Hidetoshi Urakawa, Jorie L. Skutas, Jose Lopez
Biology Faculty Articles

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The Application of Novel Research Technologies by the Deep Pelagic Nekton Dynamics of the Gulf of Mexico (DEEPEND) Consortium, Rosanna Milligan, Andrea Bernard, Kevin M. Boswell, Heather D. Bracken-Grissom, Marta D'Elia, Sergio DeRada, Cole Easson, David English, Ron Eytan, Kimberly A. Finnegan, Chuanmin Hu, Chad Lembke, Jose Lopez, Brad Penta, Travis Richards, Isabel C. Romero, Mahmood S. Shivji, Laura Timm, Joe Warren, Max Weber, R. J. David Wells, Tracey Sutton
Jose Lopez

The Application of Novel Research Technologies by the Deep Pelagic Nekton Dynamics of the Gulf of Mexico (DEEPEND) Consortium, Rosanna Milligan, Andrea Bernard, Kevin M. Boswell, Heather D. Bracken-Grissom, Marta D'Elia, Sergio DeRada, Cole Easson, David English, Ron Eytan, Kimberly A. Finnegan, Chuanmin Hu, Chad Lembke, Jose Lopez, Brad Penta, Travis Richards, Isabel C. Romero, Mahmood S. Shivji, Laura Timm, Joe Warren, Max Weber, R. J. David Wells, Tracey Sutton
Mahmood Shivji

The Application of Novel Research Technologies by the Deep Pelagic Nekton Dynamics of the Gulf of Mexico (DEEPEND) Consortium, Rosanna Milligan, Andrea Bernard, Kevin M. Boswell, Heather D. Bracken-Grissom, Marta D'Elia, Sergio DeRada, Cole Easson, David English, Ron Eytan, Kimberly A. Finnegan, Chuanmin Hu, Chad Lembke, Jose Lopez, Brad Penta, Travis Richards, Isabel C. Romero, Mahmood S. Shivji, Laura Timm, Joe Warren, Max Weber, R. J. David Wells, Tracey Sutton
Andrea Bernard

The Application of Novel Research Technologies by the Deep Pelagic Nekton Dynamics of the Gulf of Mexico (DEEPEND) Consortium, Rosanna Milligan, Andrea Bernard, Kevin M. Boswell, Heather D. Bracken-Grissom, Marta D'Elia, Sergio DeRada, Cole Easson, David English, Ron Eytan, Kimberly A. Finnegan, Chuanmin Hu, Chad Lembke, Jose Lopez, Brad Penta, Travis Richards, Isabel C. Romero, Mahmood S. Shivji, Laura Timm, Joe Warren, Max Weber, R. J. David Wells, Tracey Sutton
Rosanna Milligan

The Application of Novel Research Technologies by the Deep Pelagic Nekton Dynamics of the Gulf of Mexico (DEEPEND) Consortium, Rosanna Milligan, Andrea Bernard, Kevin M. Boswell, Heather D. Bracken-Grissom, Marta D'Elia, Sergio DeRada, Cole Easson, David English, Ron Eytan, Kimberly A. Finnegan, Chuanmin Hu, Chad Lembke, Jose Lopez, Brad Penta, Travis Richards, Isabel C. Romero, Mahmood S. Shivji, Laura Timm, Joe Warren, Max Weber, R. J. David Wells, Tracey Sutton
Tracey Sutton

After the Taxonomic Identification Phase: Addressing the Functions of Symbiotic Communities Within Marine Invertebrates, Jose Lopez
Biology Faculty Books and Book Chapters

Depth-Dependent Environmental Drivers of Microbial Plankton Community Structure in the Northern Gulf of Mexico, Cole Easson, Jose Lopez
Biology Faculty Articles

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Reconstruction of Family-Level Phylogenetic Relationships within Demospongiae (Porifera) Using Nuclear Encoded Housekeeping Genes, Malcolm S. Hill, April Hill, Jose Lopez, Kevin J. Peterson
Jose Lopez

Depth-Dependent Environmental Drivers of Microbial Plankton Community Structure in the Northern Gulf of Mexico, Cole Easson, Jose Lopez
Jose Lopez

2018

Comparison of Porifera Bacterial Symbiont Community Profiles Based on Host Species and Source Template, Celeste Banfill, Jose Lopez
Jose Lopez

Ongoing Transposon-Mediated Genome Reduction in the Luminous Bacterial Symbionts of Deep-Sea Ceratioid Anglerfishes, Tory Hendry, Lindsay L. Freed, Dana Fadera, Dante Fenolio, Tracey Sutton, Jose Lopez
Tracey Sutton

Fine grained compositional analysis of Port Everglades Inlet microbiome using high throughput DNA sequencing, Lauren M. O'Connell, Song Gao, Donald S. McCorquodale Jr., Jay M. Fleisher, Jose Lopez
Jose Lopez

Ongoing Transposon-Mediated Genome Reduction in the Luminous Bacterial Symbionts of Deep-Sea Ceratioid Anglerfishes, Tory Hendry, Lindsay L. Freed, Dana Fadera, Dante Fenolio, Tracey Sutton, Jose Lopez
Jose Lopez

Culture-Independent Characterization of the Microbiome of Healthy Pulp, Christopher Widmer, Jorie L. Skutas, Cole Easson, Jose Lopez, Calvin Torneck, Michael Flax, Taner Cem Sayin
Jose Lopez

Ongoing Transposon-Mediated Genome Reduction in the Luminous Bacterial Symbionts of Deep-Sea Ceratioid Anglerfishes, Tory Hendry, Lindsay L. Freed, Dana Fadera, Dante Fenolio, Tracey Sutton, Jose Lopez
Marine & Environmental Sciences Faculty Articles

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Culture-Independent Characterization of the Microbiome of Healthy Pulp, Christopher Widmer, Jorie L. Skutas, Cole Easson, Jose Lopez, Calvin Torneck, Michael Flax, Taner Cem Sayin
Biology Faculty Articles

Fine grained compositional analysis of Port Everglades Inlet microbiome using high throughput DNA sequencing, Lauren M. O'Connell, Song Gao, Donald S. McCorquodale Jr., Jay M. Fleisher, Jose Lopez
Marine & Environmental Sciences Faculty Articles

PDF

The Application of Novel Research Technologies by the Deep Pelagic Nekton Dynamics of the Gulf of Mexico (DEEPEND) Consortium, Rosanna Milligan, Andrea Bernard, Kevin M. Boswell, Heather D. Bracken-Grissom, Marta D'Elia, Sergio DeRada, Cole Easson, David English, Ron Eytan, Kimberly A. Finnegan, Chuanmin Hu, Chad Lembke, Jose Lopez, Brad Penta, Travis Richards, Isabel C. Romero, Mahmood S. Shivji, Laura Timm, Joe Warren, Max Weber, R. J. David Wells, Tracey Sutton
Marine & Environmental Sciences Faculty Articles

Comparison of Porifera Bacterial Symbiont Community Profiles Based on Host Species and Source Template, Celeste Banfill, Jose Lopez
Lopez Laboratory: Genomics & Microbial Data

2016

The Chicken or the Egg Paradox Revisited: The Birth and Death of Genes, Jose Lopez
Jose Lopez

Updates of the Global Invertebrate Genome Alliance (GIGA) for Comparative Genomics, Jose Lopez
HCAS Ocean Science Research Symposium

2012

The Chicken or the Egg Paradox Revisited: The Birth and Death of Genes, Jose Lopez
CAHSS Intellectual Conversations