Genome-wide association study reveals genetic variants associated with HIV-1C infection in a Botswana study population, Andrey Shevchenko, Daria V. Zhernakova, Sergey Malov, Aleksey Komissarov, Sofia Kolchanova, Gaik Tamazian, Alexey Antonik, Nikolay Cherkasov, Sergey Kliver, Anastasiia Turenko, Mikhail Rotkevich, Igor Evsyukov, David Vlahov, Prisca K. Thami, Simani Gaseitsiwe, Vladimir Novitsky, Myron Essex, Stephen James O'Brien
Biology Faculty Articles

APOBEC3G Genetic Variants and Their Influence on the Progression to AIDS, Ping An, Gabriela Bleiber, Priya Duggal, George Nelson, Margaret May, Bastien Mangeat, Irene Alobwede, Didier Trono, David Vlahov, Sharyne Donfield, James J. Goedert, John Phair, Susan Buchbinder, Stephen J. O'Brien, Amalio Telenti, Cheryl Winkler
Stephen O'Brien

Association of DC-SIGN Promoter Polymorphism with Increased Risk for Parenteral, but Not Mucosal, Acquisition of Human Immunodeficiency Virus Type 1 Infection, Maureen P. Martin, Michael M. Lederman, Holli B. Hutcheson, James J. Goedert, George W. Nelson, Yvette van Kooyk, Roger Detels, Susan Buchbinder, Keith Hoots, David Vlahov, Stephen J. O'Brien, Mary Carrington
Stephen O'Brien

Consistent Effects of TSG101 Genetic Variability on Multiple Outcomes of Exposure to Human Immunodeficiency Virus Type 1, Arman A. Bashirova, Gabriela Bleiber, Ying Qi, Holli Hutcheson, Traci Yamashita, Randall C. Johnson, Jie Cheng, Galit Alter, James J. Goedert, Susan Buchbinder, Keith Hoots, David Vlahov, Margaret May, Frank Maldarelli, Lisa Jacobson, Stephen J. O'Brien, Amalio Telenti, Mary Carrington
Stephen O'Brien

Effect of a Single Amino Acid Change in MHC Class I Molecules on the Rate of Progression to AIDS, Xiaojiang Gao, George W. Nelson, Peter Karacki, Maureen P. Martin, John Phair, Richard A. Kaslow, James J. Goedert, Susan Buchbinder, Keith Hoots, David Vlahov, Stephen J. O'Brien, Mary Carrington
Stephen O'Brien

HLA-Cw*04 and Hepatitis C Virus Persistence, Chloe L. Thio, Xiaojiang Gao, James J. Goedert, David Vlahov, Kenrad E. Nelson, Margaret Hilgartner, Stephen J. O'Brien, Peter Karacki, Jacquie Astemborski, Mary Carrington, David L. Thomas
Stephen O'Brien

Mitochondrial DNA Haplogroups Influence AIDS Progression, Sher L. Hendrickson, Holli Hutcheson, Eduardo Ruiz-Pesini, Jason C. Poole, J. A. Lautenberger, Efe Sezgin, Lawrence Kingsley, James J. Goedert, David Vlahov, Sharyne Donfield, Douglas C. Wallace, Stephen J. O'Brien
Biology Faculty Articles

Consistent Effects of TSG101 Genetic Variability on Multiple Outcomes of Exposure to Human Immunodeficiency Virus Type 1, Arman A. Bashirova, Gabriela Bleiber, Ying Qi, Holli Hutcheson, Traci Yamashita, Randall C. Johnson, Jie Cheng, Galit Alter, James J. Goedert, Susan Buchbinder, Keith Hoots, David Vlahov, Margaret May, Frank Maldarelli, Lisa Jacobson, Stephen J. O'Brien, Amalio Telenti, Mary Carrington
Biology Faculty Articles

Behavioral Risk Exposure and Host Genetics of Susceptibility to HIV-1 Infection, Sadeep Shrestha, Steffanie A. Strathdee, Noya Galai, T. K. Oleksyk, M. Daniele Fallin, Shruti Mehta, Daniel Schaid, David Vlahov, Stephen J. O'Brien, Matthew W. Smith
Biology Faculty Articles

Haplotype Analysis of the SDF-1 (CXCL12) Gene in a Longitudinal HIV-1/AIDS Cohort Study, William Modi, K. Scott, James J. Goedert, David Vlahov, Susan Buchbinder, Roger Detels, Sharyne Donfield, Stephen J. O'Brien, Cheryl Winkler
Biology Faculty Articles

AIDS Restriction HLA Allotypes Target Distinct Intervals of HIV-1 Pathogenesis, Xiaojiang Gao, Arman A. Bashirova, Astrid K. N. Iversen, John Phair, James J. Goedert, Susan Buchbinder, Keith Hoots, David Vlahov, Marcus Altfeld, Stephen J. O'Brien, Mary Carrington
Biology Faculty Articles

The Effect of RANTES Chemokine Genetic Variants on Early HIV-1 Plasma RNA Among African American Injection Drug Users, Priya Duggal, Cheryl Winkler, Ping An, Xiao-Fang Yu, Homayoon Farzadegan, Stephen J. O'Brien, T. H. Beaty, David Vlahov
Biology Faculty Articles

Dominant Effects of CCR2-CCR5 Haplotypes in HIV-1 Disease Progression, Cheryl Winkler, Houria Hendel, Mary Carrington, Michael W. Smith, George W. Nelson, Stephen J. O'Brien, John Phair, David Vlahov, Lisa Jacobson, Jay Rappaport, Alexandre Vasilescu, Sebastien Berlin-Maghit, Ping An, Wei Lu, Jean-Marie Andrieu, Francois Schachter, Amu Therwath, Jean-Francois Zagury
Biology Faculty Articles

Association of DC-SIGN Promoter Polymorphism with Increased Risk for Parenteral, but Not Mucosal, Acquisition of Human Immunodeficiency Virus Type 1 Infection, Maureen P. Martin, Michael M. Lederman, Holli B. Hutcheson, James J. Goedert, George W. Nelson, Yvette van Kooyk, Roger Detels, Susan Buchbinder, Keith Hoots, David Vlahov, Stephen J. O'Brien, Mary Carrington
Biology Faculty Articles

APOBEC3G Genetic Variants and Their Influence on the Progression to AIDS, Ping An, Gabriela Bleiber, Priya Duggal, George Nelson, Margaret May, Bastien Mangeat, Irene Alobwede, Didier Trono, David Vlahov, Sharyne Donfield, James J. Goedert, John Phair, Susan Buchbinder, Stephen J. O'Brien, Amalio Telenti, Cheryl Winkler
Biology Faculty Articles

Cytotoxic T-Lymphocyte Antigen 4 Gene and Recovery from Hepatitis B Virus Infection, Chloe L. Thio, Timothy L. Mosbruger, Richard A. Kaslow, Christopher L. Karp, Steffanie A. Strathdee, David Vlahov, Stephen J. O'Brien, Jacquie Astemborski, David L. Thomas
Biology Faculty Articles

HLA and NK Cell Inhibitory Receptor Genes in Resolving Hepatitis C Virus Infection, Salim I. Khakoo, Chloe L. Thio, Maureen P. Martin, Collin R. Brooks, Xiaojiang Gao, Jacquie Astemborski, Jie Cheng, James J. Goedert, David Vlahov, Margaret Hilgartner, Steven Cox, Ann-Margeret Little, Graeme J. Alexander, Matthew E. Cramp, Stephen J. O'Brien, William M. C. Rosenberg, David L. Thomas, Mary Carrington
Biology Faculty Articles

MICA and Recovery from Hepatitis C Virus and Hepatitis B Virus Infections, Peter Karacki, Xiaojiang Gao, Chloe L. Thio, D. L. Thomas, James J. Goedert, David Vlahov, Richard A. Kaslow, Steffanie A. Strathdee, Margaret Hilgartner, Stephen J. O'Brien, Mary Carrington
Biology Faculty Articles

An Analysis of Tumor Necrosis Factor α Gene Polymorphisms and Haplotypes with Natural Clearance of Hepatitis C Virus Infection, Chloe L. Thio, James J. Goedert, Timothy L. Mosbruger, David Vlahov, Steffanie A. Strathdee, Stephen J. O'Brien, Jacquie Astemborski, D. L. Thomas
Biology Faculty Articles

A High-Density Admixture Map for Disease Gene Discovery in African Americans, MIchael W. Smith, Nick Patterson, J. A. Lautenberger, Ann L. Truelove, Gavin J. McDonald, Alicja Waliszewska, Andre A. Mignault, Zeng Yi, Guy de The, Myron Essex, Jean-Louis Sankale, Jason H. Moore, Kwabena Poku, John Phair, James J. Goedert, David Vlahov, Scott M. Williams, Sarah A. Tishkoff, Cheryl Winkler, Francisco M. De La Vega, Trevor Woodage, John J. Sninsky, David A. Hafler, David Altshuler, Dennis A. Gilbert, Stephen J. O'Brien, David Reich
Biology Faculty Articles

A Tumor Necrosis Factor-α-Inducible Promoter Variant of Interferon-γ Accelerates CD4+ T Cell Depletion in Human Immunodeficiency Virus-1-Infected Individuals, Ping An, David Vlahov, Joseph Margolick, John Phair, Thomas R. O'Brien, J. A. Lautenberger, Stephen J. O'Brien, Cheryl Winkler
Biology Faculty Articles

Genetic Influence of CXCR6 Chemokine Receptor Alleles on PCP-Mediated AIDS Progression Among African Americans, Priya Duggal, P. An, T. H. Beaty, Steffanie A. Strathdee, H. Farzadegan, R. D. Markham, L. Johnson, Stephen J. O'Brien, David Vlahov, Cheryl Winkler
Biology Faculty Articles

Haplotype Diversity in the Interleukin-4 Gene is Not Associated with HIV-1 transmission and AIDS Progression, William Modi, Thomas R. O'Brien, David Vlahov, Susan Buchbinder, Edward Gomperts, John Phair, Stephen J. O'Brien, Cheryl Winkler
Biology Faculty Articles

Epistatic Interaction Between KIR3DS1 and HLA-B Delays the Progression to AIDS, Maureen P. Martin, Xiaojiang Gao, Jeong-Hee Lee, George W. Nelson, Roger Detels, James J. Goedert, Susan Buchbinder, Keith Hoots, David Vlahov, John Trowsdale, Michael Wilson, Stephen J. O'Brien, Mary Carrington
Biology Faculty Articles

Modulating Influence on HIV/Aids by Interacting RANTES Gene Variants, Ping An, George W. Nelson, Lihua Wang, Sharyne Donfield, James J. Goedert, John Phair, David Vlahov, Susan Buchbinder, William L. Farrar, William Modi, Stephen J. O'Brien, Cheryl Winkler
Biology Faculty Articles

HLA-Cw*04 and Hepatitis C Virus Persistence, Chloe L. Thio, Xiaojiang Gao, James J. Goedert, David Vlahov, Kenrad E. Nelson, Margaret Hilgartner, Stephen J. O'Brien, Peter Karacki, Jacquie Astemborski, Mary Carrington, David L. Thomas
Biology Faculty Articles

Racial Differences in HLA Class II Associations with Hepatitis C Virus Outcomes, Chloe L. Thio, David L. Thomas, James J. Goedert, David Vlahov, Kenrad E. Nelson, Margaret Hilgartner, Stephen J. O'Brien, Peter Karacki, Darlene Marti, Jacquie Astemborski, Mary Carrington
Biology Faculty Articles

Effect of a Single Amino Acid Change in MHC Class I Molecules on the Rate of Progression to AIDS, Xiaojiang Gao, George W. Nelson, Peter Karacki, Maureen P. Martin, John Phair, Richard A. Kaslow, James J. Goedert, Susan Buchbinder, Keith Hoots, David Vlahov, Stephen J. O'Brien, Mary Carrington
Biology Faculty Articles

Genetic Restriction of HIV-1 Pathogenesis to AIDS by Promoter Alleles of IL10, Hyoung Doo Shin, Cheryl Winkler, J. Claiborne Stephens, Jay Bream, Howard Young, James J. Goedert, Thomas R. O'Brien, David Vlahov, Susan Buchbinder, Janis Giorgi, Charles Rinaldo, Sharyne Donfield, Anne Willoughby, Stephen J. O'Brien, Michael W. Smith
Biology Faculty Articles

Influence of CCR5 Promoter Haplotypes on AIDS Progression in African–Americans, Ping An, Maureen P. Martin, George W. Nelson, Mary Carrington, Michael W. Smith, Kui Gong, David Vlahov, Stephen J. O'Brien, Cheryl Winkler
Biology Faculty Articles

Reduced Risk of AIDS Lymphoma in Individuals Heterozygous for the CCR5-Δ32 Mutation, Michael Dean, Lisa Jacobson, Glen McFarlane, Joseph Margolick, Frank J. Jenkins, O. M. Zack Howard, Hui-Fang Dong, James J. Goedert, Susan Buchbinder, Edward Gomperts, David Vlahov, Joost J. Oppenheim, Stephen J. O'Brien, Mary Carrington
Biology Faculty Articles

Class II HLA Alleles and Hepatitis B Virus Persistence in African Americans, Chloe L. Thio, Mary Carrington, Darlene Marti, Stephen J. O'Brien, David Vlahov, Kenrad E. Nelson, Jacquie Astemborski, David L. Thomas
Biology Faculty Articles

HLA and HIV-1: Heterozygote Advantage and B*35-Cw*04 Disadvantage, Mary Carrington, George W. Nelson, Maureen P. Martin, Teri Kissner, David Vlahov, James J. Goedert, Richard A. Kaslow, Susan Buchbinder, Keith Hoots, Stephen J. O'Brien
Biology Faculty Articles

Genetic Acceleration of AIDS Progression by a Promoter Variant of CCR5, Maureen P. Martin, Michael Dean, Michael W. Smith, Cheryl Winkler, Bernard Gerrard, Nelson L. Michael, Benhur Lee, Robert W. Doms, Joseph Margolick, Susan Buchbinder, James J. Goedert, Thomas R. O'Brien, Margaret Hilgartner, David Vlahov, Stephen J. O'Brien, Mary Carrington
Biology Faculty Articles

Genetic Restriction of AIDS Pathogenesis by an SDF-1 Chemokine Gene Variant, Cheryl Winkler, William Modi, Michael W. Smith, George W. Nelson, Xueyun Wu, Mary Carrington, Michael Dean, Tasaku Honjo, Kai Tashiro, D. Yabe, Susan Buchbinder, Eric Vittinghoff, James J. Goedert, Thomas R. O'Brien, Lisa Jacobson, Roger Detels, Sharyne Donfield, Anne Willoughby, Edward Gomperts, David Vlahov, John Phair, ALIVE Study, Hemophilia Growth and Development Study, Multicenter AIDS Cohort Study, Multicenter Hemophilia Cohort Study, San Francisco City Cohort, Stephen J. O'Brien
Biology Faculty Articles

Contrasting Genetic Influence of CCR2 and CCR5 Variants on HIV-1 Infection and Disease Progression, Michael W. Smith, Michael Dean, Mary Carrington, Cheryl Winkler, Gavin A. Huttley, Deborah A. Lomb, James J. Goedert, Thomas R. O'Brien, Lisa Jacobson, Richard A. Kaslow, Susan Buchbinder, Eric Vittinghoff, David Vlahov, Keith Hoots, Margaret Hilgartner, Hemophilia Growth and Development Study, Multicenter AIDS Cohort Study, Multicenter Hemophilia Cohort Study, San Francisco City Cohort, ALIVE Study, Stephen J. O'Brien
Biology Faculty Articles

Genetic Restriction of HIV-1 Infection and Progression to AIDS by a Deletion Allele of the CKR5 Structural Gene, Michael Dean, Mary Carrington, Cheryl Winkler, Gavin A. Huttley, Michael W. Smith, Rando Allikmets, James J. Goedert, Susan Buchbinder, Eric Vittinghoff, Edward Gomperts, Sharyne Donfield, David Vlahov, Richard A. Kaslow, A. J. Saah, Charles Rinaldo, Roger Detels, Hemophilia Growth and Development Study, Multicenter AIDS Cohort Study, Multicenter Hemophilia Cohort Study, San Francisco City Cohort, Stephen J. O'Brien
Biology Faculty Articles